Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 EIF3EP1-201ENST00000433978 1316 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 CASC19-228ENST00000641414 1684 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC105749.1-201ENST00000631338 2008 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 RN7SKP237-201ENST00000364663 301 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 CYCSP17-201ENST00000407870 315 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC002367.1-201ENST00000416765 405 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 RPA2P2-201ENST00000419698 796 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 ISCA1P1-201ENST00000426679 387 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC018804.1-201ENST00000430381 618 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 CDY14P-201ENST00000431260 1014 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 RPS10P3-201ENST00000439253 494 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 H3F3BP1-201ENST00000440551 403 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC005002.1-201ENST00000447458 540 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 TPT1P14-201ENST00000448018 505 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL591363.1-201ENST00000450091 483 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 CDY23P-201ENST00000451661 1014 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 OR6C5P-201ENST00000452388 923 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 DDX39BP2-208ENST00000453923 258 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC008026.1-201ENST00000460492 447 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 OR4G11P-201ENST00000492842 939 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 RPL12P7-201ENST00000493832 494 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC092709.1-201ENST00000521355 1045 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 RBMS2P1-201ENST00000525031 1226 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 OR9G2P-201ENST00000533326 880 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 PDCL3P1-201ENST00000534575 734 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 ATP5F1P7-201ENST00000567330 760 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC007262.1-201ENST00000604099 321 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AL589743.7-201ENST00000612637 233 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AP004607.9-201ENST00000618202 316 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC015726.3-201ENST00000624501 418 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 SNORA16A-202ENST00000628458 135 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 AC006213.6-201ENST00000623722 4179 ntBASIC6.68□□□□□ -1.34
SSU72Q9NP77 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSU72Q9NP77 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSU72Q9NP77 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SSU72Q9NP77 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNU6-543P-201ENST00000362576 108 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNU4-91P-201ENST00000364778 135 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNU1-55P-201ENST00000365510 158 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 LCN1P2-201ENST00000372030 223 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 Y_RNA.408-201ENST00000383987 102 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 SNORA51.7-201ENST00000384171 134 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 RNU6-253P-201ENST00000384730 105 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 USP9YP6-201ENST00000413550 854 ntBASIC6.67□□□□□ -1.34
SSU72Q9NP77 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms