Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RNA5SP90-201ENST00000364801 99 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RNA5SP455-201ENST00000365190 119 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RN7SKP126-201ENST00000411143 300 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RPL7AP49-201ENST00000429522 581 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL591438.1-201ENST00000433508 581 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AC006427.1-201ENST00000514359 712 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RN7SKP66-201ENST00000516681 231 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 OR1F2P-201ENST00000570470 933 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 MIR4646-201ENST00000580775 63 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AC006116.3-201ENST00000592968 361 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL139124.1-201ENST00000609123 421 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 SAMMSON-227ENST00000642114 1199 ntBASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KIAA1549Q9HCM3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.71□□□□□ -1.65
KIAA1549Q9HCM3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
KIAA1549Q9HCM3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
KIAA1549Q9HCM3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RPS26P13-201ENST00000419030 330 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RPS27AP6-201ENST00000427962 448 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 EIF3KP3-201ENST00000514461 639 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC022832.1-201ENST00000530718 645 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 YWHABP2-201ENST00000540201 713 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC002069.2-201ENST00000603580 883 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC009027.1-201ENST00000604510 479 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC100827.5-201ENST00000615883 426 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 ADAM24P-201ENST00000398655 2101 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC073429.2-201ENST00000569694 1444 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 SNURFL-201ENST00000309296 343 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RPS27P18-201ENST00000431701 247 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 RPS24P16-201ENST00000497294 392 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AP001922.4-201ENST00000526967 290 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 MIR4480-201ENST00000582492 71 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC087385.3-201ENST00000620477 187 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC091953.3-201ENST00000623220 236 ntBASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.71□□□□□ -1.66
KIAA1549Q9HCM3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms