Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 HMGB1P40-201ENST00000525121 540 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC090022.1-201ENST00000546569 311 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC126177.5-201ENST00000549599 178 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AL713998.2-201ENST00000604538 1198 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AL359513.1-201ENST00000614364 557 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC007204.2-201ENST00000615022 616 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCSER1Q9C0I3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AL360270.2-201ENST00000562952 5985 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RNA5SP339-201ENST00000390987 122 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 PEX12P1-201ENST00000400284 1048 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AL390774.1-201ENST00000411924 246 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 CBX1P3-201ENST00000413296 527 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 CYCSP12-201ENST00000437729 300 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 OR52E3P-201ENST00000452083 936 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AC018638.3-201ENST00000461273 132 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RPS26P39-201ENST00000469206 341 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RPL7P6-201ENST00000480903 738 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RN7SL447P-201ENST00000494711 245 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RPEP1-201ENST00000504507 658 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AC079395.2-201ENST00000610982 737 ntBASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CCSER1Q9C0I3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCSER1Q9C0I3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCSER1Q9C0I3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CCSER1Q9C0I3 CASC19-255ENST00000641733 1385 ntBASIC5.96□□□□□ -1.45
CCSER1Q9C0I3 AC093909.5-201ENST00000621839 1799 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 RN7SKP162-201ENST00000363605 345 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC090018.1-201ENST00000434369 367 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC104634.1-201ENST00000452720 462 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC011225.1-201ENST00000457751 369 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 SNORA70.11-201ENST00000515987 138 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 SNORA70.13-201ENST00000516116 138 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 NMNAT1P5-201ENST00000559657 841 ntBASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.96□□□□□ -1.46
CCSER1Q9C0I3 AC009597.2-201ENST00000604659 592 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms