Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC084824.2-201ENST00000548906 345 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 AC027281.1-201ENST00000574178 758 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 MIR4311-201ENST00000580794 100 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.48□□□□□ -1.53
PKP4Q99569 AL360012.1-201ENST00000602813 131 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.48□□□□□ -1.53
PKP4Q99569 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PKP4Q99569 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
PKP4Q99569 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 RNA5SP131-201ENST00000365452 119 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PKP4Q99569 AC104297.1-201ENST00000393779 870 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 GNG5P5-201ENST00000420444 220 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 MTND6P12-201ENST00000428247 522 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 RPL17P35-201ENST00000432217 549 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 AC006335.2-201ENST00000437993 330 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 NANOGP9-201ENST00000439890 892 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 RPL36AP39-201ENST00000445859 318 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 RPS23P9-201ENST00000448848 438 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 NPM1P19-201ENST00000450070 712 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.47□□□□□ -1.53
PKP4Q99569 RN7SL284P-201ENST00000498823 275 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.47□□□□□ -1.53
PKP4Q99569 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 AK4P6-201ENST00000505168 528 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.47□□□□□ -1.53
PKP4Q99569 RN7SKP253-201ENST00000516424 309 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
PKP4Q99569 TRIM51DP-201ENST00000529746 596 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 CR383656.14-201ENST00000551951 406 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 IGBP1P1-201ENST00000554337 1009 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.47□□□□□ -1.53
PKP4Q99569 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.47□□□□□ -1.53
PKP4Q99569 AC025857.2-201ENST00000602711 238 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 GMCL1P2-201ENST00000605230 823 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC015712.7-201ENST00000615211 635 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 AL122125.1-201ENST00000616999 600 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC006840.1-201ENST00000623069 542 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC079776.5-201ENST00000641920 211 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PKP4Q99569 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 AC140134.1-201ENST00000511830 3544 ntBASIC5.47□□□□□ -1.53
PKP4Q99569 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKP4Q99569 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PKP4Q99569 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PKP4Q99569 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PKP4Q99569 AC104964.3-201ENST00000606115 2860 ntBASIC5.46□□□□□ -1.53
PKP4Q99569 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PKP4Q99569 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PKP4Q99569 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PKP4Q99569 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.46□□□□□ -1.53
PKP4Q99569 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PKP4Q99569 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PKP4Q99569 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
PKP4Q99569 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PKP4Q99569 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PKP4Q99569 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKP4Q99569 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKP4Q99569 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.46□□□□□ -1.54
PKP4Q99569 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKP4Q99569 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKP4Q99569 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms