Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 AC091912.1-201ENST00000511351 248 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 ENPP7P9-201ENST00000514456 627 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 SCARNA20.4-201ENST00000516969 131 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 AP005119.2-201ENST00000579735 1105 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.54□□□□□ -1.04
IFT140Q96RY7 MFSD8-220ENST00000641243 1422 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 UGT2B24P-201ENST00000514441 1597 ntBASIC8.54□□□□□ -1.04
IFT140Q96RY7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
IFT140Q96RY7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AL021331.1-201ENST00000402817 582 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 RSU1P3-201ENST00000412878 835 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC044797.1-201ENST00000445744 679 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 CEACAMP6-201ENST00000452007 574 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC010350.1-201ENST00000504908 231 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 RN7SKP276-201ENST00000516242 268 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AP003080.1-202ENST00000526526 915 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC067959.1-201ENST00000604334 379 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 CYCSP1-201ENST00000604815 315 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 AL683813.2-201ENST00000605245 502 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 AC079777.1-201ENST00000623836 1953 ntBASIC8.53□□□□□ -1.04
IFT140Q96RY7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
IFT140Q96RY7 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
IFT140Q96RY7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
IFT140Q96RY7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 MIR134-201ENST00000385258 73 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 OR8V1P-201ENST00000395193 873 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AL732292.1-201ENST00000426692 226 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 CDC27P1-201ENST00000445384 715 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC097173.1-201ENST00000505862 819 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 HMGB1P23-201ENST00000518743 568 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC138701.1-201ENST00000524329 714 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 MIR92B-201ENST00000607575 96 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC104118.1-201ENST00000607625 1589 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 CR381572.2-201ENST00000624852 397 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC004158.1-201ENST00000564508 4319 ntBASIC8.52□□□□□ -1.05
IFT140Q96RY7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
IFT140Q96RY7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
IFT140Q96RY7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms