Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 MTND2P32-201ENST00000521584 1038 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL121839.1-201ENST00000556233 1185 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 RPA2P1-201ENST00000556557 721 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 NPIPB1P-202ENST00000588786 828 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AF230666.2-201ENST00000602328 725 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC013244.3-201ENST00000605614 388 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC112503.1-201ENST00000608436 391 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL365181.4-201ENST00000609800 547 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 RN7SL261P-201ENST00000613441 282 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC004801.6-201ENST00000616571 978 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC097655.1-201ENST00000635075 318 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC138907.8-201ENST00000623981 2256 ntBASIC5.83□□□□□ -1.48
VPS50Q96JG6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS50Q96JG6 AL603750.1-201ENST00000624216 1717 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AL353796.1-201ENST00000561542 3241 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC119674.1-202ENST00000641333 1860 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 RNU1-49P-201ENST00000363468 159 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 SNORA51.9-201ENST00000384295 124 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 SNORA77.2-201ENST00000408571 112 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 RN7SKP199-201ENST00000410325 305 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 RPS3AP25-201ENST00000411660 793 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 HMGN1P20-201ENST00000411849 300 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 RPL12P12-201ENST00000424633 501 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 KRT8P51-201ENST00000438938 274 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 ATP5LP2-201ENST00000440646 311 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 RRM2P4-201ENST00000441721 562 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 ACA64.1-201ENST00000459171 127 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC104164.3-201ENST00000467363 1258 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 RPSAP37-201ENST00000470913 821 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 RPL34P33-201ENST00000486062 334 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 CYCSP38-201ENST00000559840 322 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AGGF1P9-201ENST00000561884 913 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC090236.2-201ENST00000587933 1101 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC112220.2-201ENST00000605513 533 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AL355480.1-201ENST00000629041 99 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.82□□□□□ -1.48
VPS50Q96JG6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS50Q96JG6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS50Q96JG6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms