Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC138832.1-201ENST00000522871 556 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AP000790.1-201ENST00000528891 737 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 POLR2KP1-201ENST00000553226 168 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.87□□□□□ -1.15
HLA-CQ95604 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 RN7SL753P-201ENST00000581238 290 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC090312.2-201ENST00000582687 378 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-CQ95604 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AL451054.1-201ENST00000621770 772 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC026634.1-201ENST00000634369 198 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 BRD7P2-201ENST00000466133 1944 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 AC104083.1-201ENST00000569449 2615 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HLA-CQ95604 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 AL118496.1-201ENST00000440201 1812 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HLA-CQ95604 SF3A3P1-201ENST00000446317 1477 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-CQ95604 AC131392.2-201ENST00000505635 4332 ntBASIC7.87□□□□□ -1.15
HLA-CQ95604 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC016831.3-201ENST00000446451 1723 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC004014.2-201ENST00000623718 5122 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 CCDC162P-202ENST00000368966 6751 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 Y_RNA.132-201ENST00000363421 102 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 RN7SKP36-201ENST00000363997 312 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 SSX6-201ENST00000376932 562 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 SNORD116-23-201ENST00000384645 92 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 RNA5SP23-201ENST00000391006 105 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 RN7SKP268-201ENST00000411107 316 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 BOLA3P4-201ENST00000418151 400 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AL158073.1-201ENST00000426848 1104 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 RPL5P25-201ENST00000441148 775 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 FGF7P3-201ENST00000454645 303 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC103851.1-201ENST00000506833 274 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.86□□□□□ -1.15
HLA-CQ95604 RNU6-445P-201ENST00000516949 107 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 RNU6-794P-201ENST00000517261 64 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.86□□□□□ -1.15
HLA-CQ95604 MIR3663-201ENST00000583207 97 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AC104785.1-201ENST00000603220 588 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AC008638.3-201ENST00000603341 463 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AC090948.1-201ENST00000607464 549 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 MIR6849-201ENST00000618543 69 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 RN7SL680P-201ENST00000620379 299 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 AC009268.2-201ENST00000621925 457 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AL161891.1-201ENST00000621575 4636 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AP000473.2-201ENST00000602659 1537 ntBASIC7.86□□□□□ -1.15
HLA-CQ95604 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-CQ95604 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms