Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC104964.3-201ENST00000606115 2860 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.71□□□□□ -1.34
ERCC4Q92889 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 AL022311.1-201ENST00000623726 19416 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 CR382285.2-201ENST00000624662 1495 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 AC008432.1-201ENST00000615912 1320 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 AC004076.2-201ENST00000620532 3323 ntBASIC6.71□□□□□ -1.34
ERCC4Q92889 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ERCC4Q92889 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.7□□□□□ -1.34
ERCC4Q92889 SAMM50P1-201ENST00000455403 1399 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.7□□□□□ -1.34
ERCC4Q92889 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ERCC4Q92889 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 RNU4-28P-201ENST00000364739 141 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC099535.1-201ENST00000408928 371 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 AL158825.1-201ENST00000414735 521 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AL158827.1-201ENST00000416300 391 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.7□□□□□ -1.34
ERCC4Q92889 NMD3P2-201ENST00000421815 761 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.7□□□□□ -1.34
ERCC4Q92889 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC016027.4-201ENST00000450866 277 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 RPL12P39-201ENST00000455456 496 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 TPT1P1-201ENST00000458495 518 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.7□□□□□ -1.34
ERCC4Q92889 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 RPL29P23-201ENST00000486188 442 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC010374.1-201ENST00000503762 1237 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC078899.1-201ENST00000521432 1185 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC145350.1-201ENST00000567426 208 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 MRPS21P8-201ENST00000569196 235 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 AC011891.2-201ENST00000604949 397 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 FAM72A-208ENST00000607379 1139 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AL080312.2-201ENST00000613001 630 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC096861.1-201ENST00000616652 240 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AC008115.4-201ENST00000619780 775 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 AL357562.1-201ENST00000624911 609 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.7□□□□□ -1.34
ERCC4Q92889 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 MTCO1P7-201ENST00000419523 1542 ntBASIC6.7□□□□□ -1.34
ERCC4Q92889 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
ERCC4Q92889 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ERCC4Q92889 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ERCC4Q92889 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.69□□□□□ -1.34
ERCC4Q92889 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.69□□□□□ -1.34
ERCC4Q92889 SNORD116-2-201ENST00000384274 95 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 SNORD116-6-201ENST00000384711 96 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 GAPDHP15-201ENST00000398586 975 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 NACAP7-201ENST00000407371 609 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 THEM7P-201ENST00000419556 672 ntBASIC6.69□□□□□ -1.34
ERCC4Q92889 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms