Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 ABCA11P-202ENST00000504019 2110 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 HSPA8P15-201ENST00000401676 786 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AL354766.1-201ENST00000423396 542 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 RPL7AP61-201ENST00000443410 636 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AL451063.1-201ENST00000450164 1133 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC006463.2-201ENST00000473326 348 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 RN7SL423P-201ENST00000486202 304 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 MTND6P2-201ENST00000512226 524 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 SCARNA16.4-201ENST00000516956 187 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 MIR1254-2-201ENST00000579553 63 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC005377.1-201ENST00000605126 456 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 AC073869.10-201ENST00000642016 354 ntBASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHROOM3Q8TF72 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 RNU1-146P-201ENST00000364015 165 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 RNU1-74P-201ENST00000384108 171 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 MIR23A-201ENST00000385245 73 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL645733.1-201ENST00000402250 217 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 RPL7AP49-201ENST00000429522 581 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 FAM96AP1-201ENST00000430879 482 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL591438.1-201ENST00000433508 581 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 PGAM1P13-201ENST00000507497 754 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC126177.5-201ENST00000549599 178 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL139124.1-201ENST00000609123 421 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL137918.1-201ENST00000624542 1922 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC092681.1-201ENST00000297369 291 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC006466.1-201ENST00000438721 289 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 NOP56P2-201ENST00000447491 769 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 RPL7P61-201ENST00000451721 751 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 PSAT1P4-201ENST00000466500 526 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 NDUFA5P9-201ENST00000472609 340 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC005412.2-201ENST00000492004 341 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC072052.1-201ENST00000496556 306 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC024940.3-201ENST00000538551 316 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 FKBP1AP1-201ENST00000594588 318 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AC005252.1-201ENST00000604518 1063 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 AP005432.2-201ENST00000608162 586 ntBASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.44□□□□□ -1.54
SHROOM3Q8TF72 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.43□□□□□ -1.54
SHROOM3Q8TF72 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms