Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC092646.2-201ENST00000431242 2095 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 PRNCR1-201ENST00000635449 12727 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.326-201ENST00000365176 113 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC008171.1-201ENST00000395058 200 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MIR1302-11-201ENST00000408051 138 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MIR1302-9-201ENST00000408365 138 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MIR1302-10-201ENST00000408734 138 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RPL23AP76-201ENST00000441860 458 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 OR6K1P-201ENST00000456766 971 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 IGBP1P5-201ENST00000507524 1000 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.675-201ENST00000516389 149 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RN7SKP11-201ENST00000517018 287 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AP003072.1-201ENST00000531740 145 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC007537.1-201ENST00000539347 327 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC126323.4-201ENST00000566935 234 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC012146.2-201ENST00000576545 416 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 SIGLEC31P-201ENST00000594237 551 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC012065.3-201ENST00000602736 439 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC020765.1-201ENST00000604296 328 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC008277.2-201ENST00000605196 797 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MIR1302-2-201ENST00000607096 138 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AL442067.2-201ENST00000614033 363 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AL353726.1-201ENST00000614041 1000 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC010205.1-201ENST00000616668 449 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC012629.3-201ENST00000623397 328 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC026108.1-201ENST00000635444 547 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC099654.15-201ENST00000639802 509 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC132825.8-201ENST00000640783 297 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MTND4P27-201ENST00000450813 1354 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MAPK10-365ENST00000641902 3825 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.9-201ENST00000362354 101 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 RNU1-24P-201ENST00000364285 165 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 SNORA70G-201ENST00000383923 142 ntBASIC6.28□□□□□ -1.4
ATG4DQ86TL0 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.582-201ENST00000391023 95 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms