Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 U3.22-201ENST00000391120 215 ntBASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 RPS29P10-201ENST00000439197 166 ntBASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 AL356390.1-201ENST00000455684 397 ntBASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 GLUD1P3-202ENST00000508551 200 ntBASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 AC005962.2-201ENST00000611427 652 ntBASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.46□□□□□ -1.05
SNAPC4Q5SXM2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.46□□□□□ -1.06
SNAPC4Q5SXM2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 SNORD125-201ENST00000459538 96 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 PPIAP21-201ENST00000464473 501 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 OR5M2P-201ENST00000529003 936 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 TVP23CP2-201ENST00000571473 623 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC020915.5-201ENST00000596836 964 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC009027.1-201ENST00000604510 479 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC244107.2-201ENST00000611773 76 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AL158152.1-201ENST00000602652 1435 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 RN7SKP227-201ENST00000364445 330 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 SNORA57.1-201ENST00000391227 145 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 BX510359.2-201ENST00000417920 305 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 RN7SL188P-201ENST00000469842 285 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC025674.1-201ENST00000507074 324 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC006427.1-201ENST00000514359 712 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC021483.2-201ENST00000567415 758 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AC060780.2-201ENST00000589047 198 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 AL139041.1-201ENST00000605480 610 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.45□□□□□ -1.06
SNAPC4Q5SXM2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AL592293.2-201ENST00000422292 996 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC013356.1-201ENST00000489027 564 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 OR4A43P-201ENST00000532938 908 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AP001880.2-201ENST00000538233 448 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 AC011944.2-201ENST00000624440 683 ntBASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNAPC4Q5SXM2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 AC139713.2-214ENST00000642059 1811 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 SNORA70F-201ENST00000384142 135 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 MIR129-1-201ENST00000384972 72 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 RPL11P3-201ENST00000395256 523 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 IGHV5-78-201ENST00000450948 295 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms