Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SKP250-201ENST00000363924 321 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 MIR191-201ENST00000384873 92 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 OR7E101P-201ENST00000400428 513 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SKP86-201ENST00000410454 332 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RPL12P9-201ENST00000412942 488 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL359885.1-201ENST00000415786 903 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL139158.1-201ENST00000424719 340 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL136455.1-201ENST00000441083 1240 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 CYCSP24-201ENST00000445119 316 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC068228.1-201ENST00000461723 211 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC090589.1-201ENST00000473109 362 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RNA5SP340-201ENST00000517132 107 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC100784.1-201ENST00000522790 310 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 MIR4502-201ENST00000580432 81 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SL52P-201ENST00000584271 284 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SL787P-201ENST00000613000 284 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SL544P-201ENST00000617232 284 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RN7SL763P-201ENST00000620922 284 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AL390318.1-201ENST00000624564 687 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AP003400.3-201ENST00000624904 346 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC58Q4VC31 AC104966.1-201ENST00000467010 1464 ntBASIC4.79□□□□□ -1.64
CCDC58Q4VC31 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC007996.1-201ENST00000620414 2821 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 OR9G4-201ENST00000302957 984 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 COX6B1P3-201ENST00000312310 260 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 OR52B1P-201ENST00000316506 909 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 RNU1-150P-201ENST00000362491 162 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AL034417.1-201ENST00000399343 800 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 DBIP1-201ENST00000401435 260 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AL035660.1-201ENST00000422041 222 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 NDUFS5P5-201ENST00000437256 321 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 EIF2S2P5-201ENST00000457635 968 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC109464.1-201ENST00000511091 819 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 HMGB1P42-201ENST00000532126 553 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC011270.1-201ENST00000558606 583 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC011500.1-201ENST00000601963 469 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AP005431.1-201ENST00000618479 319 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 MIR6839-201ENST00000620425 113 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC111152.1-202ENST00000635848 339 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AC097461.1-201ENST00000568928 2821 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 AL162456.1-201ENST00000634535 2006 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 MIPEPP2-201ENST00000422560 1819 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 IFIT1P1-201ENST00000400497 1449 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 OR4G1P-202ENST00000641173 1788 ntBASIC4.78□□□□□ -1.64
CCDC58Q4VC31 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC58Q4VC31 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms