Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RN7SL170P-201ENST00000487098 295 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC114781.3-201ENST00000512083 142 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.97□□□□□ -1.61
RFX4Q33E94 OR8G3P-201ENST00000533406 921 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AL451049.1-201ENST00000608672 497 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.97□□□□□ -1.61
RFX4Q33E94 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 MRE11P1-201ENST00000464884 2127 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.97□□□□□ -1.61
RFX4Q33E94 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RFX4Q33E94 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RFX4Q33E94 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RFX4Q33E94 MAPK10-320ENST00000641462 6696 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 AC011503.2-201ENST00000594230 1500 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
RFX4Q33E94 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.96□□□□□ -1.61
RFX4Q33E94 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
RFX4Q33E94 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFX4Q33E94 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC011447.7-201ENST00000624228 1590 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 MTCO1P46-201ENST00000451639 1491 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RFX4Q33E94 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 NEPNP-201ENST00000404786 1371 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 RNA5SP433-201ENST00000364491 114 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 MIR551A-201ENST00000385042 96 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AL078599.1-201ENST00000402075 293 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 RPL35AP21-201ENST00000437667 333 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 GAPDHP58-201ENST00000438477 1006 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AL136455.1-201ENST00000441083 1240 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 RN7SL168P-201ENST00000463821 279 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 RPS23P6-201ENST00000466136 431 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 CBX1P5-201ENST00000475330 559 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 RN7SL814P-201ENST00000487715 300 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 RN7SL649P-201ENST00000496974 275 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 NIFKP7-201ENST00000503365 834 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX4Q33E94 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 RNA5SP473-201ENST00000516402 125 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 SNORA70.20-201ENST00000516848 126 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.96□□□□□ -1.62
RFX4Q33E94 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.96□□□□□ -1.62
RFX4Q33E94 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX4Q33E94 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX4Q33E94 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX4Q33E94 AC009027.1-201ENST00000604510 479 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC015914.2-201ENST00000618167 288 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC025262.3-201ENST00000623666 360 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 AC083843.2-201ENST00000568248 6253 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX4Q33E94 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.96□□□□□ -1.62
RFX4Q33E94 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFX4Q33E94 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RFX4Q33E94 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RFX4Q33E94 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.95□□□□□ -1.62
RFX4Q33E94 RNU6-249P-201ENST00000363016 102 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 RNA5SP296-201ENST00000410523 111 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 AC127526.2-201ENST00000426436 775 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.95□□□□□ -1.62
RFX4Q33E94 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.95□□□□□ -1.62
RFX4Q33E94 AL031584.1-201ENST00000447169 754 ntBASIC4.95□□□□□ -1.62
RFX4Q33E94 BX842559.2-201ENST00000451418 605 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms