Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.18□□□□□ -1.58
SKP1P63208 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SKP1P63208 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SKP1P63208 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SKP1P63208 RNA5SP453-201ENST00000362503 119 ntBASIC5.18□□□□□ -1.58
SKP1P63208 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.18□□□□□ -1.58
SKP1P63208 AC009804.1-201ENST00000400949 179 ntBASIC5.18□□□□□ -1.58
SKP1P63208 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.18□□□□□ -1.58
SKP1P63208 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.18□□□□□ -1.58
SKP1P63208 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.18□□□□□ -1.58
SKP1P63208 RPL7P45-201ENST00000455851 743 ntBASIC5.18□□□□□ -1.58
SKP1P63208 AL133445.1-201ENST00000467051 452 ntBASIC5.18□□□□□ -1.58
SKP1P63208 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.18□□□□□ -1.58
SKP1P63208 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.18□□□□□ -1.58
SKP1P63208 AC109464.1-201ENST00000511091 819 ntBASIC5.18□□□□□ -1.58
SKP1P63208 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 HMGB1P40-201ENST00000525121 540 ntBASIC5.18□□□□□ -1.58
SKP1P63208 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SKP1P63208 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SKP1P63208 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SKP1P63208 AC093591.2-201ENST00000565254 3843 ntBASIC5.18□□□□□ -1.58
SKP1P63208 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.18□□□□□ -1.58
SKP1P63208 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.18□□□□□ -1.58
SKP1P63208 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.18□□□□□ -1.58
SKP1P63208 FAM72A-208ENST00000607379 1139 ntBASIC5.18□□□□□ -1.58
SKP1P63208 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SKP1P63208 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.18□□□□□ -1.58
SKP1P63208 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
SKP1P63208 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 AC068870.1-201ENST00000563737 2455 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC112255.1-201ENST00000624070 2493 ntBASIC5.17□□□□□ -1.58
SKP1P63208 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.17□□□□□ -1.58
SKP1P63208 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SKP1P63208 RN7SKP185-201ENST00000362813 326 ntBASIC5.17□□□□□ -1.58
SKP1P63208 RN7SKP160-201ENST00000363804 340 ntBASIC5.17□□□□□ -1.58
SKP1P63208 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SKP1P63208 U3.25-201ENST00000391209 220 ntBASIC5.17□□□□□ -1.58
SKP1P63208 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 HSPA8P15-201ENST00000401676 786 ntBASIC5.17□□□□□ -1.58
SKP1P63208 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.17□□□□□ -1.58
SKP1P63208 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.17□□□□□ -1.58
SKP1P63208 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 GSTM5P1-201ENST00000434751 660 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.17□□□□□ -1.58
SKP1P63208 AL390119.1-201ENST00000440329 312 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC023271.1-201ENST00000445936 1090 ntBASIC5.17□□□□□ -1.58
SKP1P63208 GAPDHP25-201ENST00000447061 1001 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.17□□□□□ -1.58
SKP1P63208 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 SIAH1P1-201ENST00000479411 923 ntBASIC5.17□□□□□ -1.58
SKP1P63208 RPL7P40-201ENST00000481703 745 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC022133.1-201ENST00000490961 571 ntBASIC5.17□□□□□ -1.58
SKP1P63208 RPS24P16-201ENST00000497294 392 ntBASIC5.17□□□□□ -1.58
SKP1P63208 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.17□□□□□ -1.58
SKP1P63208 RNA5SP362-201ENST00000516048 118 ntBASIC5.17□□□□□ -1.58
SKP1P63208 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.17□□□□□ -1.58
SKP1P63208 AL358913.1-201ENST00000554342 121 ntBASIC5.17□□□□□ -1.58
SKP1P63208 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 RN7SL356P-201ENST00000582228 248 ntBASIC5.17□□□□□ -1.58
SKP1P63208 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.17□□□□□ -1.58
SKP1P63208 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.17□□□□□ -1.58
SKP1P63208 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
SKP1P63208 AL078621.3-201ENST00000623707 2042 ntBASIC5.17□□□□□ -1.58
SKP1P63208 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SKP1P63208 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.17□□□□□ -1.58
SKP1P63208 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SKP1P63208 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.16□□□□□ -1.58
SKP1P63208 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SKP1P63208 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.16□□□□□ -1.58
SKP1P63208 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.16□□□□□ -1.58
SKP1P63208 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
SKP1P63208 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SKP1P63208 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SKP1P63208 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SKP1P63208 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.16□□□□□ -1.58
SKP1P63208 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
SKP1P63208 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.16□□□□□ -1.58
SKP1P63208 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
SKP1P63208 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms