Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC011447.7-201ENST00000624228 1590 ntBASIC4.72□□□□□ -1.65
UBA52P62987 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
UBA52P62987 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
UBA52P62987 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
UBA52P62987 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UBA52P62987 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.72□□□□□ -1.65
UBA52P62987 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
UBA52P62987 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.72□□□□□ -1.65
UBA52P62987 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.72□□□□□ -1.65
UBA52P62987 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.72□□□□□ -1.65
UBA52P62987 CR383656.5-201ENST00000547616 1340 ntBASIC4.72□□□□□ -1.65
UBA52P62987 AC022417.1-201ENST00000624768 1303 ntBASIC4.72□□□□□ -1.65
UBA52P62987 AC007996.1-201ENST00000620414 2821 ntBASIC4.71□□□□□ -1.66
UBA52P62987 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UBA52P62987 AL391422.1-201ENST00000402155 436 ntBASIC4.71□□□□□ -1.66
UBA52P62987 SPTLC1P2-201ENST00000407089 121 ntBASIC4.71□□□□□ -1.66
UBA52P62987 RN7SKP59-201ENST00000410520 314 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.71□□□□□ -1.66
UBA52P62987 MRPL53P1-201ENST00000414323 319 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AL596448.1-201ENST00000415024 392 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
UBA52P62987 AC007394.1-201ENST00000421941 531 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.71□□□□□ -1.66
UBA52P62987 AL022331.1-201ENST00000429025 477 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.71□□□□□ -1.66
UBA52P62987 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.71□□□□□ -1.66
UBA52P62987 HMGB3P24-201ENST00000433260 622 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 AC093166.4-201ENST00000457867 318 ntBASIC4.71□□□□□ -1.66
UBA52P62987 RPL32P9-201ENST00000487963 407 ntBASIC4.71□□□□□ -1.66
UBA52P62987 RN7SL184P-201ENST00000488308 297 ntBASIC4.71□□□□□ -1.66
UBA52P62987 RN7SL346P-201ENST00000491561 294 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.71□□□□□ -1.66
UBA52P62987 RNU6-615P-201ENST00000516065 106 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC079064.1-201ENST00000528365 362 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC137627.1-201ENST00000545761 289 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC006349.1-201ENST00000555526 235 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.71□□□□□ -1.66
UBA52P62987 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 AC044860.2-201ENST00000561005 179 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.71□□□□□ -1.66
UBA52P62987 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 MIR1269B-201ENST00000580405 75 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC233702.9-201ENST00000581528 203 ntBASIC4.71□□□□□ -1.66
UBA52P62987 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 CU639417.4-201ENST00000623928 207 ntBASIC4.71□□□□□ -1.66
UBA52P62987 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.71□□□□□ -1.66
UBA52P62987 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.71□□□□□ -1.66
UBA52P62987 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.66
UBA52P62987 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBA52P62987 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.7□□□□□ -1.66
UBA52P62987 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBA52P62987 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 CASC19-248ENST00000641674 1356 ntBASIC4.7□□□□□ -1.66
UBA52P62987 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 OR4F13P-202ENST00000560066 2054 ntBASIC4.7□□□□□ -1.66
UBA52P62987 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBA52P62987 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBA52P62987 AL121886.1-201ENST00000358609 435 ntBASIC4.7□□□□□ -1.66
UBA52P62987 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.7□□□□□ -1.66
UBA52P62987 AC073465.2-201ENST00000440938 498 ntBASIC4.7□□□□□ -1.66
UBA52P62987 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.7□□□□□ -1.66
UBA52P62987 AC007386.1-201ENST00000455212 582 ntBASIC4.7□□□□□ -1.66
UBA52P62987 AC004129.2-201ENST00000457229 287 ntBASIC4.7□□□□□ -1.66
UBA52P62987 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.7□□□□□ -1.66
UBA52P62987 HMGB1P42-201ENST00000532126 553 ntBASIC4.7□□□□□ -1.66
UBA52P62987 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.7□□□□□ -1.66
UBA52P62987 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.7□□□□□ -1.66
UBA52P62987 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 AC005229.3-201ENST00000603438 323 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms