Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CDC42P60953 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
CDC42P60953 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 NEPNP-201ENST00000404786 1371 ntBASIC4.81□□□□□ -1.64
CDC42P60953 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 STX3-208ENST00000641815 3236 ntBASIC4.81□□□□□ -1.64
CDC42P60953 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
CDC42P60953 TMSB4XP2-201ENST00000335179 210 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 RN7SKP74-201ENST00000362849 309 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RN7SKP187-201ENST00000365536 330 ntBASIC4.81□□□□□ -1.64
CDC42P60953 SUGT1P2-201ENST00000379452 992 ntBASIC4.81□□□□□ -1.64
CDC42P60953 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDC42P60953 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 BX323845.3-201ENST00000428215 527 ntBASIC4.81□□□□□ -1.64
CDC42P60953 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.81□□□□□ -1.64
CDC42P60953 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
CDC42P60953 AL450996.1-201ENST00000445574 1202 ntBASIC4.81□□□□□ -1.64
CDC42P60953 NOP56P2-201ENST00000447491 769 ntBASIC4.81□□□□□ -1.64
CDC42P60953 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 MRPL35P2-201ENST00000448009 511 ntBASIC4.81□□□□□ -1.64
CDC42P60953 YRDCP3-201ENST00000456507 480 ntBASIC4.81□□□□□ -1.64
CDC42P60953 TPT1P1-201ENST00000458495 518 ntBASIC4.81□□□□□ -1.64
CDC42P60953 ACA64.1-201ENST00000459171 127 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RPS23P6-201ENST00000466136 431 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RN7SL189P-201ENST00000468631 289 ntBASIC4.81□□□□□ -1.64
CDC42P60953 HMGB3P16-201ENST00000508037 287 ntBASIC4.81□□□□□ -1.64
CDC42P60953 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.81□□□□□ -1.64
CDC42P60953 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 AC005341.1-201ENST00000571086 708 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RN7SL708P-201ENST00000580952 299 ntBASIC4.81□□□□□ -1.64
CDC42P60953 MIR4271-201ENST00000582451 67 ntBASIC4.81□□□□□ -1.64
CDC42P60953 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 AC015802.2-201ENST00000589690 189 ntBASIC4.81□□□□□ -1.64
CDC42P60953 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 AC012616.1-201ENST00000600294 197 ntBASIC4.81□□□□□ -1.64
CDC42P60953 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.81□□□□□ -1.64
CDC42P60953 AL139407.1-201ENST00000613826 1175 ntBASIC4.81□□□□□ -1.64
CDC42P60953 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
CDC42P60953 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.81□□□□□ -1.64
CDC42P60953 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
CDC42P60953 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.81□□□□□ -1.64
CDC42P60953 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDC42P60953 SRRM1P3-201ENST00000426911 2678 ntBASIC4.8□□□□□ -1.64
CDC42P60953 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 TTC39DP-201ENST00000416781 1688 ntBASIC4.8□□□□□ -1.64
CDC42P60953 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.8□□□□□ -1.64
CDC42P60953 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDC42P60953 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 AC004386.1-201ENST00000393214 761 ntBASIC4.8□□□□□ -1.64
CDC42P60953 HSPA8P15-201ENST00000401676 786 ntBASIC4.8□□□□□ -1.64
CDC42P60953 RN7SKP16-201ENST00000410180 299 ntBASIC4.8□□□□□ -1.64
CDC42P60953 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.8□□□□□ -1.64
CDC42P60953 OR5M12P-201ENST00000423388 929 ntBASIC4.8□□□□□ -1.64
CDC42P60953 OR2AH1P-201ENST00000425717 928 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AC127526.2-201ENST00000426436 775 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 NPM1P22-201ENST00000427761 952 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 KCTD9P1-201ENST00000430462 1167 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.8□□□□□ -1.64
CDC42P60953 AL161722.2-201ENST00000434731 981 ntBASIC4.8□□□□□ -1.64
CDC42P60953 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.8□□□□□ -1.64
CDC42P60953 RN7SL168P-201ENST00000463821 279 ntBASIC4.8□□□□□ -1.64
CDC42P60953 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
CDC42P60953 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms