Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 MTATP6P13-201ENST00000438531 667 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AL356121.1-201ENST00000442911 156 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 CRYGGP-201ENST00000443337 145 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC104306.1-201ENST00000449702 371 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 RPL23AP35-201ENST00000451906 501 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AL133351.3-201ENST00000454998 193 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 CFTRP1-201ENST00000456646 183 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC116337.2-201ENST00000477662 156 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 PFN1P8-201ENST00000497012 543 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AC004069.2-201ENST00000505438 1114 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC098799.3-201ENST00000506095 438 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC109927.2-201ENST00000506416 303 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
GFRA1P56159 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 AP002963.1-201ENST00000530590 184 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.1□□□□□ -1.43
GFRA1P56159 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.1□□□□□ -1.43
GFRA1P56159 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.1□□□□□ -1.43
GFRA1P56159 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC022884.3-201ENST00000579571 248 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC107982.3-201ENST00000584957 985 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC090181.2-201ENST00000602975 672 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC005514.1-201ENST00000623521 208 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC135068.5-201ENST00000624197 983 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AL132796.3-201ENST00000624703 900 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AC003992.1-201ENST00000635364 557 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
GFRA1P56159 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 Z97989.1-201ENST00000531702 2421 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 AC096992.2-201ENST00000609553 1684 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 AP005139.1-201ENST00000580702 1647 ntBASIC6.1□□□□□ -1.43
GFRA1P56159 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.1□□□□□ -1.43
GFRA1P56159 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA1P56159 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA1P56159 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 AC092821.2-201ENST00000545710 2042 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
GFRA1P56159 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 AC010132.4-201ENST00000569883 1368 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC096656.1-201ENST00000623826 1364 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA1P56159 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA1P56159 Y_RNA.3-201ENST00000362331 103 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 RNU4-21P-201ENST00000362802 126 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 RNU1-55P-201ENST00000365510 158 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA1P56159 RNU2-42P-201ENST00000410697 113 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC245060.4-201ENST00000413293 1121 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA1P56159 AL663061.1-201ENST00000416625 580 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AL133325.1-201ENST00000421090 382 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 RPL31P54-201ENST00000429803 370 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC008072.1-201ENST00000434254 824 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA1P56159 RPS25P9-201ENST00000435591 252 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.09□□□□□ -1.43
GFRA1P56159 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 SNRPBP1-201ENST00000443634 282 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 PFN1P11-201ENST00000445829 389 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA1P56159 AL020997.1-201ENST00000446554 349 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 RPL36AP33-201ENST00000450395 310 ntBASIC6.09□□□□□ -1.43
GFRA1P56159 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms