Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.96□□□□□ -1.46
VCPP55072 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VCPP55072 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VCPP55072 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.96□□□□□ -1.46
VCPP55072 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.95□□□□□ -1.46
VCPP55072 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.95□□□□□ -1.46
VCPP55072 AP000473.2-201ENST00000602659 1537 ntBASIC5.95□□□□□ -1.46
VCPP55072 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.95□□□□□ -1.46
VCPP55072 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
VCPP55072 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 RN7SKP185-201ENST00000362813 326 ntBASIC5.95□□□□□ -1.46
VCPP55072 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 RNU1-106P-201ENST00000384382 164 ntBASIC5.95□□□□□ -1.46
VCPP55072 AL354766.1-201ENST00000423396 542 ntBASIC5.95□□□□□ -1.46
VCPP55072 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 AC138761.5-201ENST00000433967 325 ntBASIC5.95□□□□□ -1.46
VCPP55072 OR52B5P-201ENST00000435337 951 ntBASIC5.95□□□□□ -1.46
VCPP55072 MEMO1P4-201ENST00000453590 386 ntBASIC5.95□□□□□ -1.46
VCPP55072 RPS7P6-201ENST00000485777 579 ntBASIC5.95□□□□□ -1.46
VCPP55072 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.95□□□□□ -1.46
VCPP55072 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.95□□□□□ -1.46
VCPP55072 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.95□□□□□ -1.46
VCPP55072 RBM22P12-201ENST00000567098 1255 ntBASIC5.95□□□□□ -1.46
VCPP55072 ADAM3B-201ENST00000569937 840 ntBASIC5.95□□□□□ -1.46
VCPP55072 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.95□□□□□ -1.46
VCPP55072 MIR4480-201ENST00000582492 71 ntBASIC5.95□□□□□ -1.46
VCPP55072 MIR4260-201ENST00000583107 67 ntBASIC5.95□□□□□ -1.46
VCPP55072 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.95□□□□□ -1.46
VCPP55072 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.95□□□□□ -1.46
VCPP55072 AL137246.1-201ENST00000607072 977 ntBASIC5.95□□□□□ -1.46
VCPP55072 AP000346.3-201ENST00000622821 210 ntBASIC5.95□□□□□ -1.46
VCPP55072 OR52B5P-202ENST00000641118 1110 ntBASIC5.95□□□□□ -1.46
VCPP55072 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VCPP55072 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VCPP55072 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
VCPP55072 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 CYB5AP4-201ENST00000396692 399 ntBASIC5.94□□□□□ -1.46
VCPP55072 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 CYCSP6-201ENST00000434498 302 ntBASIC5.94□□□□□ -1.46
VCPP55072 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 TPT1P13-201ENST00000449760 499 ntBASIC5.94□□□□□ -1.46
VCPP55072 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.94□□□□□ -1.46
VCPP55072 PRELID3BP5-201ENST00000508612 460 ntBASIC5.94□□□□□ -1.46
VCPP55072 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 AC110775.1-201ENST00000513721 462 ntBASIC5.94□□□□□ -1.46
VCPP55072 AC021678.3-201ENST00000517893 476 ntBASIC5.94□□□□□ -1.46
VCPP55072 NRBF2P4-201ENST00000520874 850 ntBASIC5.94□□□□□ -1.46
VCPP55072 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 RPL10P14-201ENST00000565265 298 ntBASIC5.94□□□□□ -1.46
VCPP55072 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.94□□□□□ -1.46
VCPP55072 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 AL390318.1-201ENST00000624564 687 ntBASIC5.94□□□□□ -1.46
VCPP55072 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.94□□□□□ -1.46
VCPP55072 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VCPP55072 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.94□□□□□ -1.46
VCPP55072 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.93□□□□□ -1.46
VCPP55072 UGT2B24P-201ENST00000514441 1597 ntBASIC5.93□□□□□ -1.46
VCPP55072 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 LINC01963-201ENST00000562038 3148 ntBASIC5.93□□□□□ -1.46
VCPP55072 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VCPP55072 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VCPP55072 RNU1-77P-201ENST00000390868 162 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms