Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.63□□□□□ -1.51
NR1H2P55055 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H2P55055 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H2P55055 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H2P55055 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 RNU6-185P-201ENST00000384421 107 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NR1H2P55055 RPS27AP11-201ENST00000402798 447 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 XKRYP4-201ENST00000414395 483 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.62□□□□□ -1.51
NR1H2P55055 OR5M12P-201ENST00000423388 929 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 OSTCP4-201ENST00000424397 449 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 AP000936.3-201ENST00000438127 255 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 YWHAZP2-201ENST00000440317 728 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 MTCYBP21-201ENST00000443300 1113 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.62□□□□□ -1.51
NR1H2P55055 RPL6P5-201ENST00000445678 828 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 XKRYP5-201ENST00000449659 483 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 PPIAP20-201ENST00000449839 135 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 AP000547.1-201ENST00000454360 617 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 GM2AP2-201ENST00000491764 562 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AP002453.1-201ENST00000492327 668 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC104629.1-201ENST00000494226 508 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 OR7E157P-201ENST00000494376 911 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 OR7E99P-201ENST00000505750 922 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.62□□□□□ -1.51
NR1H2P55055 TPM3P3-201ENST00000521343 354 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.62□□□□□ -1.51
NR1H2P55055 HAUS1P3-201ENST00000523909 662 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AL109741.3-201ENST00000561748 592 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.62□□□□□ -1.51
NR1H2P55055 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 AF230666.2-201ENST00000602328 725 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC005776.1-201ENST00000603164 290 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC079610.2-201ENST00000604818 690 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 AP004607.9-201ENST00000618202 316 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 AL357140.4-201ENST00000636827 412 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 AC018717.1-201ENST00000457712 1505 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 CASC19-246ENST00000641625 1606 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NR1H2P55055 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 HSPA8P14-201ENST00000552265 1805 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H2P55055 AC133552.1-201ENST00000569988 4007 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 AC024587.1-201ENST00000505925 2157 ntBASIC5.62□□□□□ -1.51
NR1H2P55055 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H2P55055 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 RN7SKP78-201ENST00000364711 318 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 QRSL1P1-201ENST00000400977 1540 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 HMGB1P13-201ENST00000406019 642 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 GPS2P1-201ENST00000411761 986 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H2P55055 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 NMD3P2-201ENST00000421815 761 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AL606495.1-201ENST00000422100 813 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC092865.3-201ENST00000425390 1026 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.61□□□□□ -1.51
NR1H2P55055 LYARP1-201ENST00000436977 1501 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AL645936.1-201ENST00000441979 518 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H2P55055 RPL5P7-201ENST00000444235 813 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
NR1H2P55055 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H2P55055 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms