Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FAR2P2-201ENST00000413041 594 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 FAR2P4-202ENST00000425399 584 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 USP9YP9-201ENST00000429406 715 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCS2P54868 AC008072.1-201ENST00000434254 824 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AL590399.4-201ENST00000436561 601 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 ELOCP3-201ENST00000439303 348 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCS2P54868 KATNBL1P4-201ENST00000503545 918 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCS2P54868 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGCS2P54868 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.08□□□□□ -1.44
HMGCS2P54868 ST13P12-201ENST00000508958 1094 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AC091912.1-201ENST00000511351 248 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.08□□□□□ -1.44
HMGCS2P54868 BNIP3P1-201ENST00000547295 580 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGCS2P54868 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.08□□□□□ -1.44
HMGCS2P54868 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.08□□□□□ -1.44
HMGCS2P54868 AC244107.2-201ENST00000611773 76 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AP003400.3-201ENST00000624904 346 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AL138820.1-201ENST00000617901 5305 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HMGCS2P54868 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HMGCS2P54868 MTND5P12-201ENST00000502851 1449 ntBASIC6.08□□□□□ -1.44
HMGCS2P54868 AC003973.3-201ENST00000624863 2822 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HMGCS2P54868 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HMGCS2P54868 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCS2P54868 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCS2P54868 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCS2P54868 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCS2P54868 RN7SKP149-201ENST00000363008 344 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 RNA5SP90-201ENST00000364801 99 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 RNA5SP87-201ENST00000384155 118 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 MIR141-201ENST00000384975 95 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 CHEK2P3-201ENST00000416118 248 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCS2P54868 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS2P54868 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS2P54868 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.07□□□□□ -1.44
HMGCS2P54868 RPS29P10-201ENST00000439197 166 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCS2P54868 AC073465.2-201ENST00000440938 498 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS2P54868 RPL34P20-201ENST00000442771 351 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCS2P54868 AC079168.1-201ENST00000458741 345 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 RN7SL738P-201ENST00000470264 297 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AC093890.1-201ENST00000502554 540 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 OR51K1P-201ENST00000510214 950 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 RN7SKP260-201ENST00000516907 149 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AC021006.3-201ENST00000530771 192 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 EDDM3DP-201ENST00000554692 434 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCS2P54868 MTCO1P1-201ENST00000624263 1081 ntBASIC6.07□□□□□ -1.44
HMGCS2P54868 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCS2P54868 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AC079097.1-201ENST00000512187 1399 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGCS2P54868 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 BCORP1-203ENST00000513194 5093 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS2P54868 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 RNVU1-6-201ENST00000364688 164 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCS2P54868 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCS2P54868 PPIAP9-201ENST00000403866 498 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS2P54868 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS2P54868 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCS2P54868 MGAT2P2-201ENST00000427194 797 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.06□□□□□ -1.44
HMGCS2P54868 BTF3P13-201ENST00000513224 490 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 RN7SKP248-201ENST00000516278 305 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.06□□□□□ -1.44
HMGCS2P54868 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
HMGCS2P54868 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AL031320.1-201ENST00000604177 357 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AC073575.2-201ENST00000614212 627 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AL356752.1-201ENST00000615844 593 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AC069542.2-201ENST00000624816 216 ntBASIC6.06□□□□□ -1.44
HMGCS2P54868 AC099654.6-201ENST00000636487 512 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms