Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.91□□□□□ -1.3
MRE11P49959 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 RNU6-618P-201ENST00000363518 112 ntBASIC6.9□□□□□ -1.3
MRE11P49959 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 RNY3P9-201ENST00000384727 106 ntBASIC6.9□□□□□ -1.3
MRE11P49959 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 AL391361.1-201ENST00000405580 489 ntBASIC6.9□□□□□ -1.3
MRE11P49959 GPS2P1-201ENST00000411761 986 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.9□□□□□ -1.3
MRE11P49959 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 AC092570.3-201ENST00000420113 693 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.9□□□□□ -1.3
MRE11P49959 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.9□□□□□ -1.3
MRE11P49959 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 MORF4-201ENST00000447135 971 ntBASIC6.9□□□□□ -1.3
MRE11P49959 Z99714.1-201ENST00000450463 807 ntBASIC6.9□□□□□ -1.3
MRE11P49959 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 AC079080.1-201ENST00000479841 822 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC005412.2-201ENST00000492004 341 ntBASIC6.9□□□□□ -1.3
MRE11P49959 RPL23AP73-201ENST00000492507 471 ntBASIC6.9□□□□□ -1.3
MRE11P49959 LSM3P4-201ENST00000502948 309 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.9□□□□□ -1.3
MRE11P49959 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 NPIPB14P-203ENST00000532298 987 ntBASIC6.9□□□□□ -1.3
MRE11P49959 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.9□□□□□ -1.3
MRE11P49959 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MRE11P49959 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 AC146944.4-201ENST00000602697 718 ntBASIC6.9□□□□□ -1.3
MRE11P49959 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.9□□□□□ -1.3
MRE11P49959 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.9□□□□□ -1.3
MRE11P49959 AC004477.3-201ENST00000614061 590 ntBASIC6.9□□□□□ -1.3
MRE11P49959 MIR6133-201ENST00000617057 108 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC024884.1-201ENST00000620583 399 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC095038.2-201ENST00000621464 1070 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC068620.4-201ENST00000636730 1182 ntBASIC6.9□□□□□ -1.3
MRE11P49959 AC068137.4-201ENST00000638485 296 ntBASIC6.9□□□□□ -1.3
MRE11P49959 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
MRE11P49959 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
MRE11P49959 DDX6P1-205ENST00000441966 1436 ntBASIC6.9□□□□□ -1.31
MRE11P49959 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.9□□□□□ -1.31
MRE11P49959 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.9□□□□□ -1.31
MRE11P49959 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.9□□□□□ -1.31
MRE11P49959 CDY11P-201ENST00000447168 1651 ntBASIC6.9□□□□□ -1.31
MRE11P49959 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
MRE11P49959 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 AC116158.1-201ENST00000560231 2129 ntBASIC6.89□□□□□ -1.31
MRE11P49959 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 Y_RNA.62-201ENST00000362840 99 ntBASIC6.89□□□□□ -1.31
MRE11P49959 SNORA43.1-201ENST00000364863 140 ntBASIC6.89□□□□□ -1.31
MRE11P49959 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.89□□□□□ -1.31
MRE11P49959 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 RN7SKP281-201ENST00000410472 352 ntBASIC6.89□□□□□ -1.31
MRE11P49959 RN7SKP166-201ENST00000410812 305 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AL024507.1-201ENST00000412741 274 ntBASIC6.89□□□□□ -1.31
MRE11P49959 NMD3P2-201ENST00000421815 761 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.89□□□□□ -1.31
MRE11P49959 AL121776.1-201ENST00000429337 372 ntBASIC6.89□□□□□ -1.31
MRE11P49959 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 PNKDP1-201ENST00000435914 430 ntBASIC6.89□□□□□ -1.31
MRE11P49959 COL11A2P1-205ENST00000441798 676 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AC097463.1-201ENST00000447288 481 ntBASIC6.89□□□□□ -1.31
MRE11P49959 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 AC096992.1-201ENST00000459808 709 ntBASIC6.89□□□□□ -1.31
MRE11P49959 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 RNU6-334P-201ENST00000517072 102 ntBASIC6.89□□□□□ -1.31
MRE11P49959 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
MRE11P49959 AC104115.2-201ENST00000523026 687 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.89□□□□□ -1.31
MRE11P49959 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.89□□□□□ -1.31
MRE11P49959 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.89□□□□□ -1.31
MRE11P49959 AC009852.2-201ENST00000567898 485 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AL163952.1-202ENST00000569625 600 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.89□□□□□ -1.31
MRE11P49959 MIR3691-201ENST00000578066 90 ntBASIC6.89□□□□□ -1.31
MRE11P49959 RNU4ATAC-201ENST00000580972 127 ntBASIC6.89□□□□□ -1.31
MRE11P49959 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.89□□□□□ -1.31
MRE11P49959 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms