Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC005899.6-201ENST00000620729 297 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AL049777.1-201ENST00000622740 518 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AL357562.1-201ENST00000624911 609 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 RBPJP2-201ENST00000618187 1444 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-1P43699 AC018809.2-201ENST00000602436 3823 ntBASIC4.69□□□□□ -1.66
NKX2-1P43699 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-1P43699 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-1P43699 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AL121886.1-201ENST00000358609 435 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 RN7SKP184-201ENST00000362348 333 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 U3.7-201ENST00000363668 216 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 RNU6-1257P-201ENST00000384625 110 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX2-1P43699 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX2-1P43699 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-1P43699 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-1P43699 TMEM183AP1-205ENST00000432739 290 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC002553.3-201ENST00000453002 341 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC092902.1-201ENST00000486999 259 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 SNRPCP11-201ENST00000492453 205 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 RPS17P5-201ENST00000498293 408 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 SNORA70.11-201ENST00000515987 138 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 SNORA70.13-201ENST00000516116 138 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 RNA5SP230-201ENST00000517039 122 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 SCARNA1-201ENST00000517138 166 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-1P43699 NPIPB14P-203ENST00000532298 987 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AP002373.2-201ENST00000541631 1060 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AL359219.2-201ENST00000555184 348 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC093510.2-201ENST00000562820 896 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.68□□□□□ -1.66
NKX2-1P43699 MIR4660-201ENST00000583549 74 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.68□□□□□ -1.66
NKX2-1P43699 MIR7853-201ENST00000584820 132 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC005776.1-201ENST00000603164 290 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 SUMO2P14-201ENST00000604488 293 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC145423.1-201ENST00000605712 336 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC010632.3-201ENST00000611377 369 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC016957.2-201ENST00000616998 848 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AL138693.1-201ENST00000622219 129 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AC119674.1-212ENST00000641155 993 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 GNL2P1-201ENST00000451274 2190 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NKX2-1P43699 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 TCP1P3-201ENST00000414406 1498 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 OR4F13P-202ENST00000560066 2054 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 LINC02019-201ENST00000608605 2060 ntBASIC4.68□□□□□ -1.66
NKX2-1P43699 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.68□□□□□ -1.66
NKX2-1P43699 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NKX2-1P43699 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 CASC19-284ENST00000642142 1868 ntBASIC4.67□□□□□ -1.66
NKX2-1P43699 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.67□□□□□ -1.66
NKX2-1P43699 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.67□□□□□ -1.66
NKX2-1P43699 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NKX2-1P43699 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms