Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.51□□□□□ -1.53
HTTP42858 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.51□□□□□ -1.53
HTTP42858 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.51□□□□□ -1.53
HTTP42858 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.51□□□□□ -1.53
HTTP42858 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.51□□□□□ -1.53
HTTP42858 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HTTP42858 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HTTP42858 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HTTP42858 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HTTP42858 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.51□□□□□ -1.53
HTTP42858 AL158152.1-201ENST00000602652 1435 ntBASIC5.51□□□□□ -1.53
HTTP42858 Y_RNA.333-201ENST00000365274 102 ntBASIC5.51□□□□□ -1.53
HTTP42858 GLUD1P9-201ENST00000420997 1173 ntBASIC5.51□□□□□ -1.53
HTTP42858 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.51□□□□□ -1.53
HTTP42858 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 RN7SL441P-201ENST00000492388 296 ntBASIC5.5□□□□□ -1.53
HTTP42858 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.5□□□□□ -1.53
HTTP42858 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 STX3-208ENST00000641815 3236 ntBASIC5.5□□□□□ -1.53
HTTP42858 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 AC090220.1-201ENST00000593078 1699 ntBASIC5.5□□□□□ -1.53
HTTP42858 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.5□□□□□ -1.53
HTTP42858 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HTTP42858 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 ERG-210ENST00000442448 5034 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 CYCSP19-201ENST00000411715 316 ntBASIC5.5□□□□□ -1.53
HTTP42858 RAB9AP4-201ENST00000415230 609 ntBASIC5.5□□□□□ -1.53
HTTP42858 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 SNORD125-201ENST00000459538 96 ntBASIC5.5□□□□□ -1.53
HTTP42858 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.5□□□□□ -1.53
HTTP42858 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
HTTP42858 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.5□□□□□ -1.53
HTTP42858 AL121834.1-201ENST00000572284 509 ntBASIC5.5□□□□□ -1.53
HTTP42858 MIR6075-201ENST00000620782 95 ntBASIC5.5□□□□□ -1.53
HTTP42858 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
HTTP42858 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 AP000866.6-201ENST00000638898 3579 ntBASIC5.5□□□□□ -1.53
HTTP42858 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.5□□□□□ -1.53
HTTP42858 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HTTP42858 OR8V1P-201ENST00000395193 873 ntBASIC5.5□□□□□ -1.53
HTTP42858 ATP5F1P3-201ENST00000397213 657 ntBASIC5.5□□□□□ -1.53
HTTP42858 CEACAMP8-201ENST00000413902 580 ntBASIC5.5□□□□□ -1.53
HTTP42858 LINC02210-201ENST00000444561 288 ntBASIC5.5□□□□□ -1.53
HTTP42858 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.5□□□□□ -1.53
HTTP42858 RPS12P31-201ENST00000491419 398 ntBASIC5.5□□□□□ -1.53
HTTP42858 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HTTP42858 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.5□□□□□ -1.53
HTTP42858 AC130448.2-201ENST00000624082 374 ntBASIC5.5□□□□□ -1.53
HTTP42858 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HTTP42858 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.49□□□□□ -1.53
HTTP42858 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 AC138907.8-201ENST00000623981 2256 ntBASIC5.49□□□□□ -1.53
HTTP42858 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.49□□□□□ -1.53
HTTP42858 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HTTP42858 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HTTP42858 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.49□□□□□ -1.53
HTTP42858 MRPL49P2-201ENST00000521066 465 ntBASIC5.49□□□□□ -1.53
HTTP42858 RN7SL802P-201ENST00000577858 299 ntBASIC5.49□□□□□ -1.53
HTTP42858 ARF4P1-201ENST00000605447 541 ntBASIC5.49□□□□□ -1.53
HTTP42858 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.49□□□□□ -1.53
HTTP42858 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.49□□□□□ -1.53
HTTP42858 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
HTTP42858 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HTTP42858 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.49□□□□□ -1.53
HTTP42858 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HTTP42858 AC005225.5-201ENST00000623547 2225 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms