Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL161449.1-201ENST00000414531 1199 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 ELOCP17-201ENST00000414751 326 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC019050.1-201ENST00000418508 492 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AL133325.1-201ENST00000421090 382 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 REREP1Y-201ENST00000422655 198 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 REREP2Y-201ENST00000439103 200 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AL031681.1-201ENST00000443304 400 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 SNORA81.1-201ENST00000458922 177 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 RN7SL492P-201ENST00000460700 295 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 RPS26P11-201ENST00000463445 348 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 RPS26P6-201ENST00000475156 348 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 VPS26AP1-201ENST00000483197 979 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 DCAF13P2-201ENST00000514188 555 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC022447.1-201ENST00000515358 464 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 GLYATL1P4-201ENST00000529326 906 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 OR4K7P-201ENST00000580232 945 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC024267.2-201ENST00000582737 417 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 AP002884.5-201ENST00000595053 1132 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 AL135786.2-201ENST00000608422 615 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC015540.1-201ENST00000615828 501 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 AC145207.9-201ENST00000623802 325 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 AC127502.3-201ENST00000636170 1206 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC12P31275 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC12P31275 Z99496.1-201ENST00000469424 1477 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 AC007114.2-201ENST00000576014 4281 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC12P31275 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC12P31275 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC12P31275 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 AL353743.4-201ENST00000422653 1547 ntBASIC6.2□□□□□ -1.42
HOXC12P31275 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC12P31275 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC12P31275 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC004023.1-201ENST00000561473 1744 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC12P31275 AL158152.1-201ENST00000602652 1435 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC12P31275 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC12P31275 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC12P31275 RNU6-517P-201ENST00000384362 110 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 RNU6-1215P-201ENST00000384441 102 ntBASIC6.19□□□□□ -1.42
HOXC12P31275 MIR99A-201ENST00000384906 81 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms