Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 AC131009.3-201ENST00000621809 287 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC015726.3-201ENST00000624501 418 ntBASIC5.76□□□□□ -1.49
CD40P25942 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 NCLP2-201ENST00000416078 1462 ntBASIC5.76□□□□□ -1.49
CD40P25942 AL353743.3-201ENST00000442109 1468 ntBASIC5.76□□□□□ -1.49
CD40P25942 OR52B5P-204ENST00000641744 3467 ntBASIC5.76□□□□□ -1.49
CD40P25942 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
CD40P25942 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.76□□□□□ -1.49
CD40P25942 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CD40P25942 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CD40P25942 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.75□□□□□ -1.49
CD40P25942 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 VPS35P1-201ENST00000563400 1518 ntBASIC5.75□□□□□ -1.49
CD40P25942 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CD40P25942 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 Y_RNA.408-201ENST00000383987 102 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL031577.2-201ENST00000404133 280 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL590290.1-201ENST00000405336 380 ntBASIC5.75□□□□□ -1.49
CD40P25942 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 OR51A3P-201ENST00000413596 924 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL596448.1-201ENST00000415024 392 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC019050.1-201ENST00000418508 492 ntBASIC5.75□□□□□ -1.49
CD40P25942 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 LINC00328-2P-201ENST00000436585 219 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 TXNP5-201ENST00000441043 315 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 PNPLA4P1-201ENST00000458328 305 ntBASIC5.75□□□□□ -1.49
CD40P25942 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 MTND1P16-201ENST00000465177 898 ntBASIC5.75□□□□□ -1.49
CD40P25942 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 NCOR1P1-202ENST00000486162 291 ntBASIC5.75□□□□□ -1.49
CD40P25942 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CD40P25942 RN7SL649P-201ENST00000496974 275 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC147055.4-201ENST00000504399 745 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 HSPE1P23-201ENST00000509838 286 ntBASIC5.75□□□□□ -1.49
CD40P25942 MTCO3P7-201ENST00000510008 774 ntBASIC5.75□□□□□ -1.49
CD40P25942 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.75□□□□□ -1.49
CD40P25942 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 RFPL1S-203ENST00000539579 330 ntBASIC5.75□□□□□ -1.49
CD40P25942 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
CD40P25942 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.75□□□□□ -1.49
CD40P25942 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.75□□□□□ -1.49
CD40P25942 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 AP003115.1-201ENST00000569849 463 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC004232.1-201ENST00000571388 208 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC090312.2-201ENST00000582687 378 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.75□□□□□ -1.49
CD40P25942 AF131215.7-201ENST00000602443 707 ntBASIC5.75□□□□□ -1.49
CD40P25942 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.75□□□□□ -1.49
CD40P25942 AC103881.1-201ENST00000603476 538 ntBASIC5.75□□□□□ -1.49
CD40P25942 AP000811.1-201ENST00000603803 651 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC092653.1-201ENST00000608509 531 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.75□□□□□ -1.49
CD40P25942 MIR6780B-201ENST00000610307 79 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC004241.2-201ENST00000614562 444 ntBASIC5.75□□□□□ -1.49
CD40P25942 AC008083.4-201ENST00000615076 444 ntBASIC5.75□□□□□ -1.49
CD40P25942 uc_338.9-201ENST00000617424 182 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms