Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RMST_5.1-201ENST00000618704 126 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC025262.3-201ENST00000623666 360 ntBASIC5.57□□□□□ -1.52
PCNAP12004 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 AC083843.2-201ENST00000568248 6253 ntBASIC5.57□□□□□ -1.52
PCNAP12004 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 AC005005.4-201ENST00000623789 16698 ntBASIC5.56□□□□□ -1.52
PCNAP12004 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC117409.1-201ENST00000470499 1310 ntBASIC5.56□□□□□ -1.52
PCNAP12004 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 RNA5SP273-201ENST00000362484 113 ntBASIC5.56□□□□□ -1.52
PCNAP12004 RNA5SP477-201ENST00000362639 119 ntBASIC5.56□□□□□ -1.52
PCNAP12004 RNA5SP433-201ENST00000364491 114 ntBASIC5.56□□□□□ -1.52
PCNAP12004 MIR137-201ENST00000385223 102 ntBASIC5.56□□□□□ -1.52
PCNAP12004 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 AL121878.1-201ENST00000418638 859 ntBASIC5.56□□□□□ -1.52
PCNAP12004 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.56□□□□□ -1.52
PCNAP12004 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC019205.1-201ENST00000421830 730 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AL034379.1-201ENST00000423216 253 ntBASIC5.56□□□□□ -1.52
PCNAP12004 HMGN2P27-201ENST00000427352 270 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC115283.1-201ENST00000427353 400 ntBASIC5.56□□□□□ -1.52
PCNAP12004 RPS27AP6-201ENST00000427962 448 ntBASIC5.56□□□□□ -1.52
PCNAP12004 RPS26P4-201ENST00000431743 355 ntBASIC5.56□□□□□ -1.52
PCNAP12004 ZNF965P-201ENST00000432501 817 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC007563.3-201ENST00000433233 371 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC099670.2-201ENST00000435130 321 ntBASIC5.56□□□□□ -1.52
PCNAP12004 NDUFS5P5-201ENST00000437256 321 ntBASIC5.56□□□□□ -1.52
PCNAP12004 ELOCP3-201ENST00000439303 348 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 EIF5AP4-201ENST00000441206 465 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 OR7E116P-201ENST00000448529 957 ntBASIC5.56□□□□□ -1.52
PCNAP12004 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 RPL37P23-201ENST00000492641 294 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 CAB39P1-201ENST00000502277 460 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC025458.1-201ENST00000506046 166 ntBASIC5.56□□□□□ -1.52
PCNAP12004 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 AC114781.3-201ENST00000512083 142 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 RNA5SP473-201ENST00000516402 125 ntBASIC5.56□□□□□ -1.52
PCNAP12004 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 OR8Q1P-201ENST00000526467 655 ntBASIC5.56□□□□□ -1.52
PCNAP12004 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.56□□□□□ -1.52
PCNAP12004 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 AC126615.2-201ENST00000553003 515 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 AC015911.5-201ENST00000587076 451 ntBASIC5.56□□□□□ -1.52
PCNAP12004 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.56□□□□□ -1.52
PCNAP12004 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.56□□□□□ -1.52
PCNAP12004 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 AC025016.1-201ENST00000616746 682 ntBASIC5.56□□□□□ -1.52
PCNAP12004 AL163051.2-201ENST00000618976 735 ntBASIC5.56□□□□□ -1.52
PCNAP12004 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.56□□□□□ -1.52
PCNAP12004 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCNAP12004 OR5AC4P-202ENST00000642086 985 ntBASIC5.56□□□□□ -1.52
PCNAP12004 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 AL606537.1-201ENST00000607258 2011 ntBASIC5.56□□□□□ -1.52
PCNAP12004 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCNAP12004 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.56□□□□□ -1.52
PCNAP12004 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms