Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC027216.1-201ENST00000577726 685 ntBASIC5.65□□□□□ -1.5
APOEP02649 MIR3176-201ENST00000582210 90 ntBASIC5.65□□□□□ -1.5
APOEP02649 MIR7853-201ENST00000584820 132 ntBASIC5.65□□□□□ -1.5
APOEP02649 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 AC009237.13-201ENST00000603193 276 ntBASIC5.65□□□□□ -1.5
APOEP02649 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOEP02649 WBP1LP8-201ENST00000617401 327 ntBASIC5.65□□□□□ -1.5
APOEP02649 MIR6826-201ENST00000617808 98 ntBASIC5.65□□□□□ -1.5
APOEP02649 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.65□□□□□ -1.5
APOEP02649 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.65□□□□□ -1.5
APOEP02649 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
APOEP02649 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
APOEP02649 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.65□□□□□ -1.51
APOEP02649 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
APOEP02649 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
APOEP02649 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.65□□□□□ -1.51
APOEP02649 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 MIR133B-201ENST00000362210 119 ntBASIC5.64□□□□□ -1.51
APOEP02649 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 CFL1P1-202ENST00000432948 411 ntBASIC5.64□□□□□ -1.51
APOEP02649 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 RPS11P7-201ENST00000442125 465 ntBASIC5.64□□□□□ -1.51
APOEP02649 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 RPL7P39-201ENST00000481157 744 ntBASIC5.64□□□□□ -1.51
APOEP02649 AC021106.1-201ENST00000509020 1058 ntBASIC5.64□□□□□ -1.51
APOEP02649 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 HMGB1P40-201ENST00000525121 540 ntBASIC5.64□□□□□ -1.51
APOEP02649 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.64□□□□□ -1.51
APOEP02649 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.64□□□□□ -1.51
APOEP02649 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.64□□□□□ -1.51
APOEP02649 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 uc_338.7-201ENST00000621834 124 ntBASIC5.64□□□□□ -1.51
APOEP02649 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOEP02649 CASC19-264ENST00000641912 1184 ntBASIC5.64□□□□□ -1.51
APOEP02649 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 Z95331.1-201ENST00000623075 23112 ntBASIC5.64□□□□□ -1.51
APOEP02649 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
APOEP02649 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOEP02649 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 AC083843.2-201ENST00000568248 6253 ntBASIC5.64□□□□□ -1.51
APOEP02649 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.64□□□□□ -1.51
APOEP02649 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
APOEP02649 SNORA16A-201ENST00000384342 137 ntBASIC5.63□□□□□ -1.51
APOEP02649 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
APOEP02649 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.63□□□□□ -1.51
APOEP02649 DSTNP5-201ENST00000427921 523 ntBASIC5.63□□□□□ -1.51
APOEP02649 AL136231.1-201ENST00000429407 730 ntBASIC5.63□□□□□ -1.51
APOEP02649 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.63□□□□□ -1.51
APOEP02649 FTLP19-201ENST00000433300 394 ntBASIC5.63□□□□□ -1.51
APOEP02649 TAAR4P-201ENST00000454843 1039 ntBASIC5.63□□□□□ -1.51
APOEP02649 RPS4XP12-201ENST00000461747 709 ntBASIC5.63□□□□□ -1.51
APOEP02649 AC092754.1-201ENST00000472975 479 ntBASIC5.63□□□□□ -1.51
APOEP02649 GOLGA5P1-201ENST00000507317 980 ntBASIC5.63□□□□□ -1.51
APOEP02649 AC091912.1-201ENST00000511351 248 ntBASIC5.63□□□□□ -1.51
APOEP02649 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.63□□□□□ -1.51
APOEP02649 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.63□□□□□ -1.51
APOEP02649 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.63□□□□□ -1.51
APOEP02649 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.63□□□□□ -1.51
APOEP02649 FKBP1AP1-201ENST00000594588 318 ntBASIC5.63□□□□□ -1.51
APOEP02649 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.63□□□□□ -1.51
APOEP02649 AL359513.1-201ENST00000614364 557 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms