Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AL355994.1-201ENST00000424379 260 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 BX119321.1-201ENST00000428912 797 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC092447.2-201ENST00000435487 669 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC093166.3-201ENST00000448785 303 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 OR11I1P-201ENST00000486033 954 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 RPL15P21-201ENST00000495592 567 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 RNA5SP464-201ENST00000516251 108 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 RN7SKP238-201ENST00000516483 249 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AP003396.4-201ENST00000527574 265 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC096996.1-201ENST00000563813 325 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC073389.3-201ENST00000609434 935 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 MIR6780B-201ENST00000610307 79 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC244107.2-201ENST00000611773 76 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AC109583.2-201ENST00000617367 129 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AL596275.2-207ENST00000641188 675 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AL596275.2-204ENST00000641628 552 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 AL596275.2-206ENST00000641957 626 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 SYT14P1-202ENST00000600441 1448 ntBASIC4.03□□□□□ -1.76
HLA-DQA1P01909 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQA1P01909 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
HLA-DQA1P01909 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DQA1P01909 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 GAPDHP24-201ENST00000328713 983 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC104843.2-201ENST00000427666 297 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 GAPDHP58-201ENST00000438477 1006 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AL353662.1-201ENST00000439099 327 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 RPL5P7-201ENST00000444235 813 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 RPL9P15-201ENST00000491096 532 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 RN7SL649P-201ENST00000496974 275 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 TCP11X3P-202ENST00000514289 1254 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC011853.1-201ENST00000518911 454 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC002519.2-203ENST00000567043 837 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC010615.3-201ENST00000597319 394 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC091167.5-201ENST00000605689 894 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC018695.5-201ENST00000605872 315 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 RNU6-84P-201ENST00000607737 102 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AL080312.2-201ENST00000613001 630 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AL683826.1-201ENST00000624104 627 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms