Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 FAM3C2-201ENST00000312214 681 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 RNU1-146P-201ENST00000364015 165 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 UBE2V1P15-201ENST00000407776 448 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 EI24P4-201ENST00000423683 1078 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 ZNF736P6Y-201ENST00000447526 1213 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 HGF-207ENST00000453018 721 ntTSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 RPL31P53-201ENST00000457065 348 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 RN7SKP253-201ENST00000516424 309 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC104997.1-201ENST00000519761 717 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC040174.2-201ENST00000602701 465 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC020910.2-201ENST00000603635 610 ntBASIC8.11□□□□□ -1.11
RAPGEF3O95398 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.11□□□□□ -1.11
RAPGEF3O95398 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RAPGEF3O95398 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 RNU6-386P-201ENST00000362650 107 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 TRAV35-201ENST00000390462 330 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC096921.1-201ENST00000411661 375 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AL445528.1-201ENST00000426330 420 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 VN1R21P-201ENST00000426703 765 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 RSL24D1P6-201ENST00000426934 401 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 CNOT7P1-201ENST00000429006 852 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC104629.1-201ENST00000494226 508 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 TOMM22P4-201ENST00000511318 336 ntBASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
RAPGEF3O95398 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RAPGEF3O95398 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 PRNCR1-201ENST00000635449 12727 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 RNU6-670P-201ENST00000364312 104 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 MIR600-201ENST00000385007 98 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC004690.1-201ENST00000418216 328 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 NANOGP9-201ENST00000439890 892 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 AL158053.1-201ENST00000441503 453 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 VN1R48P-201ENST00000448149 1036 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 MEMO1P4-201ENST00000453590 386 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC063943.1-201ENST00000465434 453 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC068790.7-201ENST00000602347 528 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 AC110792.4-201ENST00000609843 298 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RAPGEF3O95398 LCOR-201ENST00000286067 4542 ntBASIC8.09□□□□□ -1.11
RAPGEF3O95398 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.09□□□□□ -1.11
RAPGEF3O95398 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms