Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL157392.4-201ENST00000609756 345 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 VN1R9P-201ENST00000614184 867 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AC079395.3-201ENST00000615161 484 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS4BO75351 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS4BO75351 KYNUP3-201ENST00000574386 1341 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 AC003985.2-201ENST00000562268 1669 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS4BO75351 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 RNU1-49P-201ENST00000363468 159 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 PTCD2P2-201ENST00000415579 1095 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 HIGD1AP15-201ENST00000416198 280 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC079355.1-201ENST00000421770 223 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 RPS3AP38-201ENST00000435889 763 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 PNKDP1-201ENST00000435914 430 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 FABP5P3-201ENST00000437960 408 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 KRT8P51-201ENST00000438938 274 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 MED6P1-201ENST00000439659 713 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC245047.2-201ENST00000441060 530 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS4BO75351 TPT1P1-201ENST00000458495 518 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 TPT1P3-201ENST00000492841 512 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS4BO75351 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 RNU6-276P-201ENST00000516114 96 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 snoU109.5-201ENST00000516231 132 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 HAUS1P3-201ENST00000523909 662 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AP001858.2-201ENST00000536213 601 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC008055.1-201ENST00000547032 609 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AL356801.1-201ENST00000559320 294 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 MIR4433B-201ENST00000581329 102 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC084373.1-201ENST00000603311 235 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 RPL12P48-201ENST00000605620 304 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 RNU4-5P-201ENST00000607255 135 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC106052.1-201ENST00000608029 497 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AC092681.3-201ENST00000609463 678 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS4BO75351 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS4BO75351 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 CU459211.1-201ENST00000635667 749 ntBASIC5.94□□□□□ -1.46
VPS4BO75351 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
VPS4BO75351 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
VPS4BO75351 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS4BO75351 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS4BO75351 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 RNU4-40P-201ENST00000364351 143 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS4BO75351 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS4BO75351 AP002784.2-201ENST00000397300 549 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 RN7SKP166-201ENST00000410812 305 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 RN7SKP121-201ENST00000410842 305 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 OR51B3P-201ENST00000412287 913 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS4BO75351 AL445183.3-201ENST00000414168 502 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 NANOGP5-201ENST00000424456 877 ntBASIC5.93□□□□□ -1.46
VPS4BO75351 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS4BO75351 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms