Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RIPK2O43353 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RIPK2O43353 HSPA8P14-201ENST00000552265 1805 ntBASIC5.45□□□□□ -1.54
RIPK2O43353 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RIPK2O43353 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.45□□□□□ -1.54
RIPK2O43353 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.45□□□□□ -1.54
RIPK2O43353 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.45□□□□□ -1.54
RIPK2O43353 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.45□□□□□ -1.54
RIPK2O43353 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 SRRM1P3-201ENST00000426911 2678 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RIPK2O43353 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.44□□□□□ -1.54
RIPK2O43353 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 RN7SKP6-201ENST00000364795 319 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 RN7SKP153-201ENST00000365026 316 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 MIR191-201ENST00000384873 92 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 RPS3AP2-201ENST00000407190 754 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.44□□□□□ -1.54
RIPK2O43353 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 RPL12P17-201ENST00000432393 498 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AC000374.1-201ENST00000434698 1745 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.44□□□□□ -1.54
RIPK2O43353 AL591623.2-201ENST00000449978 222 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 NPM1P19-201ENST00000450070 712 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK2O43353 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RIPK2O43353 LSM3P4-201ENST00000502948 309 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 OR5H7P-201ENST00000514084 930 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK2O43353 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK2O43353 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK2O43353 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.44□□□□□ -1.54
RIPK2O43353 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.44□□□□□ -1.54
RIPK2O43353 MIR4472-2-201ENST00000582069 67 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AC015802.2-201ENST00000589690 189 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AC006272.2-201ENST00000594725 163 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AC124856.1-201ENST00000600819 896 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.44□□□□□ -1.54
RIPK2O43353 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.44□□□□□ -1.54
RIPK2O43353 AL603750.1-201ENST00000624216 1717 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.44□□□□□ -1.54
RIPK2O43353 OR8G3P-202ENST00000641572 1255 ntBASIC5.44□□□□□ -1.54
RIPK2O43353 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIPK2O43353 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 MTCO1P22-201ENST00000604619 1360 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RIPK2O43353 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RIPK2O43353 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.43□□□□□ -1.54
RIPK2O43353 RNA5SP105-201ENST00000391123 113 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 NPM1P40-201ENST00000412758 733 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 NANOGP4-201ENST00000427230 913 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 MTND6P12-201ENST00000428247 522 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC098818.1-201ENST00000478593 252 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 MTND6P2-201ENST00000512226 524 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.43□□□□□ -1.54
RIPK2O43353 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 OR8A2P-201ENST00000528631 952 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 AC127381.1-201ENST00000555979 939 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC011626.1-201ENST00000604710 562 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.43□□□□□ -1.54
RIPK2O43353 AC129915.3-201ENST00000634128 948 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.43□□□□□ -1.54
RIPK2O43353 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIPK2O43353 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms