Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP59-201ENST00000410520 314 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AL133445.1-201ENST00000467051 452 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 IGKV2-18-201ENST00000522607 343 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC027026.1-201ENST00000532323 742 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC084824.2-201ENST00000548906 345 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC007225.2-201ENST00000562529 256 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AP005403.1-201ENST00000579720 229 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 KATNBL1P1-201ENST00000605192 748 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC092944.2-201ENST00000605443 889 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC005972.3-201ENST00000606304 481 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AP000864.1-201ENST00000609424 650 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AL391262.2-201ENST00000622466 494 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AL356094.1-201ENST00000624663 1212 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC000095.2-202ENST00000637415 154 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 AC004076.2-201ENST00000620532 3323 ntBASIC5.91□□□□□ -1.46
SNX9Q9Y5X1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP162-201ENST00000363605 345 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 NPM1P4-201ENST00000414095 812 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 TRGV7-201ENST00000427089 353 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 RPL12P18-201ENST00000437175 325 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 SPRYD7P1-201ENST00000443861 570 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 SNORD125-201ENST00000459538 96 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 DEFB109A-201ENST00000482450 265 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ASNSP4-201ENST00000511103 447 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 BX510359.5-201ENST00000515651 304 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC026688.1-201ENST00000520639 1168 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 MIR4489-201ENST00000578869 62 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 MIR3176-201ENST00000582210 90 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ADAD1P2-201ENST00000588476 646 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC000068.2-201ENST00000608816 460 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AP005131.7-201ENST00000610087 611 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AP000894.4-201ENST00000610185 483 ntBASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX9Q9Y5X1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 TCP11X1-202ENST00000622971 1372 ntBASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNX9Q9Y5X1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX9Q9Y5X1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNX9Q9Y5X1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX9Q9Y5X1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SNX9Q9Y5X1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNX9Q9Y5X1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms