Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 OR4F13P-202ENST00000560066 2054 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 ABCC13-202ENST00000463099 3842 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 MAPK10-338ENST00000641647 3362 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AL133388.1-201ENST00000404509 287 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AL133482.1-201ENST00000415988 498 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 RANP7-201ENST00000418085 644 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 SRSF1P1-201ENST00000424058 520 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 RN7SL515P-201ENST00000463999 297 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 RPS21P4-201ENST00000487122 248 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 CDC42P3-201ENST00000518493 633 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 OR5AM1P-201ENST00000532136 1032 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC016769.4-201ENST00000616893 535 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC073869.7-201ENST00000640874 297 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC002525.1-201ENST00000624392 1622 ntBASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.42□□□□□ -1.38
CLIP2Q9UDT6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 MIR133B-201ENST00000362210 119 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 DPPA2P3-201ENST00000411853 655 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC009784.1-201ENST00000426484 460 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 NANOGP4-201ENST00000427230 913 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 DSTNP5-201ENST00000427921 523 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AL627308.1-201ENST00000435693 821 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AL359265.1-201ENST00000440296 795 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC008953.1-201ENST00000497334 318 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 HIGD1AP14-201ENST00000507617 282 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 SCARNA16.4-201ENST00000516956 187 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC122688.1-201ENST00000541494 223 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 RBM22P1-201ENST00000578589 1214 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 BX323046.1-201ENST00000610145 535 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 AL162574.1-201ENST00000615702 950 ntBASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.41□□□□□ -1.38
CLIP2Q9UDT6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 MIR223-201ENST00000385204 110 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 SNORA11B-201ENST00000408175 129 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 BRWD1P3-201ENST00000428816 390 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 RN7SL172P-201ENST00000460535 303 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 RN7SL727P-201ENST00000482164 296 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 AC072052.1-201ENST00000496556 306 ntBASIC6.4□□□□□ -1.38
CLIP2Q9UDT6 MTND6P2-201ENST00000512226 524 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms