Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC108738.1-201ENST00000603703 237 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AL122126.1-201ENST00000546905 1318 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC138907.8-201ENST00000623981 2256 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RNU1-13P-201ENST00000384499 162 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RNF10P1-201ENST00000418589 369 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC006065.1-201ENST00000422539 802 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 FABP5P2-201ENST00000439042 408 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AL035461.2-201ENST00000619201 524 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC079298.1-201ENST00000625026 1619 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AL031651.1-201ENST00000615357 1438 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RN7SL244P-201ENST00000493405 297 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC007224.1-201ENST00000564410 144 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AP000866.6-201ENST00000638898 3579 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC068446.1-201ENST00000556425 1549 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RPL11P3-201ENST00000395256 523 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 PPIAP9-201ENST00000403866 498 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 GAPDHP49-201ENST00000421421 961 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 RPL7P40-201ENST00000481703 745 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC053481.3-201ENST00000577881 843 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC009027.1-201ENST00000604510 479 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC002044.3-201ENST00000623314 541 ntBASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CHD7Q9P2D1 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.56
CHD7Q9P2D1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 NCLP2-201ENST00000416078 1462 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AL121657.1-201ENST00000327215 531 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 RPL23AP24-201ENST00000458203 385 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AK3P4-201ENST00000504283 583 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AC079097.1-201ENST00000512187 1399 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AC018765.1-201ENST00000623357 3446 ntBASIC5.27□□□□□ -1.57
CHD7Q9P2D1 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CHD7Q9P2D1 AC017079.1-201ENST00000333650 415 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms