Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC024595.1-201ENST00000623088 387 ntBASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 AL121594.5-201ENST00000631724 573 ntBASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 AP001153.1-201ENST00000641024 338 ntBASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 ZNF876P-202ENST00000398732 1485 ntBASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 CCT8P1-201ENST00000413611 1657 ntBASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCM2LQ9NUG4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC079753.1-201ENST00000623243 3868 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RNU1-5P-201ENST00000362684 144 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RNU6-353P-201ENST00000364266 108 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RN7SKP189-201ENST00000365042 330 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AL136131.1-201ENST00000406079 803 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AL356320.2-201ENST00000417263 507 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 MRPS21P5-201ENST00000417885 231 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 CDC42P6-201ENST00000421246 576 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RPL23AP85-201ENST00000421838 433 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 SETP9-201ENST00000423837 832 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 YWHAEP5-201ENST00000431545 765 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC003989.1-201ENST00000434569 565 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 NANOGP2-201ENST00000435391 727 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC128677.1-201ENST00000436016 442 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 ARAFP2-201ENST00000440565 559 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 GAPDHP20-201ENST00000444107 1007 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC007383.1-201ENST00000445875 636 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC068135.1-201ENST00000446164 246 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 PTENP1-201ENST00000447117 1215 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC092967.1-201ENST00000449016 481 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RNU7-140P-201ENST00000459546 60 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC107015.1-201ENST00000466902 747 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 MTND2P14-201ENST00000482139 351 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC091860.1-201ENST00000505723 432 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC091849.1-201ENST00000509920 121 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC093878.1-201ENST00000515630 432 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 SNRPCP6-201ENST00000528310 210 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 OSBPL9P5-201ENST00000542581 171 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC090695.1-201ENST00000561269 1222 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC023813.2-201ENST00000564321 469 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC007448.1-201ENST00000582714 234 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC091057.2-201ENST00000602594 792 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AP001267.4-201ENST00000602598 545 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC016877.3-201ENST00000606778 504 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC015982.1-201ENST00000608113 465 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC009237.15-201ENST00000610252 501 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC092106.3-201ENST00000611308 722 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC093783.1-201ENST00000612976 329 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 VN1R74P-201ENST00000613259 503 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AC078883.4-201ENST00000623218 367 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AP001962.1-201ENST00000624114 559 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 LINC02211-204ENST00000642024 1070 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 MTND4P10-201ENST00000446199 1363 ntBASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCM2LQ9NUG4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms