Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SNORD65-201ENST00000391079 73 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RPL30P16-201ENST00000419341 429 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 OR6C64P-201ENST00000419708 825 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL133325.1-201ENST00000421090 382 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RPL7AP51-201ENST00000422016 760 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SPATA20P1-201ENST00000423089 438 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MTATP6P13-201ENST00000438531 667 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MTCYBP42-201ENST00000444653 1130 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC093899.1-201ENST00000457984 376 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RN7SL390P-201ENST00000470634 284 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MARK2P8-201ENST00000476069 952 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RPL29P23-201ENST00000486188 442 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 LINC00888-204ENST00000487386 421 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RN7SL37P-201ENST00000490461 307 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 NPM1P27-201ENST00000502784 830 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC091965.3-201ENST00000506236 208 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC093878.1-201ENST00000515630 432 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 C1GALT1P3-201ENST00000522049 819 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 BCAS2P1-201ENST00000528022 632 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 OR4A6P-201ENST00000534364 970 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PPIAP14-201ENST00000577627 496 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC233702.7-202ENST00000582941 211 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MIR212-201ENST00000586026 110 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RSL24D1P11-201ENST00000591045 491 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL049840.5-201ENST00000602827 552 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC007204.2-201ENST00000615022 616 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC073968.1-201ENST00000618594 637 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AC018692.2-201ENST00000624130 348 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL160394.1-201ENST00000624765 724 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 AL132640.3-201ENST00000630473 177 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 FANCD2P2-201ENST00000437591 1400 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
FOXP3Q9BZS1 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 MTND5P24-201ENST00000438892 1767 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AC132825.1-201ENST00000463573 2247 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AP000547.3-204ENST00000588548 2523 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 MIR621-201ENST00000384919 96 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-1320P-201ENST00000390838 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 RNU6-1269P-201ENST00000391139 107 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL360271.1-201ENST00000395679 510 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 UBTFL2-201ENST00000411859 1191 ntBASIC6.72□□□□□ -1.33
FOXP3Q9BZS1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms