Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC092824.1-201ENST00000483524 576 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 RPF2P2-201ENST00000504693 896 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC108471.1-201ENST00000513977 287 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 IGLVV-66-201ENST00000523818 341 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 DUXAP1-201ENST00000556632 463 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC090888.1-201ENST00000561335 1141 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 HIRAP1-201ENST00000605318 787 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SNORA11.6-201ENST00000619030 128 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC022509.4-201ENST00000621404 572 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 Z98755.1-201ENST00000407015 1384 ntBASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 AL353743.3-201ENST00000442109 1468 ntBASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 CDY19P-201ENST00000411668 1613 ntBASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 CDY18P-201ENST00000438294 1609 ntBASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 HSPD1P8-201ENST00000400121 1658 ntBASIC6.65□□□□□ -1.35
TRIM55Q9BYV6 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 ZNF402P-201ENST00000404435 3100 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 RNU6-560P-201ENST00000364007 108 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 RNU5A-2P-201ENST00000384337 116 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP146-201ENST00000410242 334 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 QRSL1P2-201ENST00000418582 964 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 MORF4L1P6-201ENST00000418771 268 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 SNRPEP5-201ENST00000425442 278 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC00328-2P-201ENST00000436585 219 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 RPL23AP76-201ENST00000441860 458 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 MTND5P2-201ENST00000442927 1142 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 CCDC11P1-201ENST00000503137 1162 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC083906.1-201ENST00000509298 406 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 DCAF13P2-201ENST00000514188 555 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AP005639.1-201ENST00000526939 192 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC007537.1-201ENST00000539347 327 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC146944.4-201ENST00000602697 718 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC019257.2-201ENST00000605539 497 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AP000577.1-201ENST00000624366 878 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC053481.2-202ENST00000582394 1500 ntBASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM55Q9BYV6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms