Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 OR4A41P-201ENST00000533053 928 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 DPPA2P4-201ENST00000563717 878 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AC090953.1-201ENST00000604305 1092 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AP003400.3-201ENST00000624904 346 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 SMG1P7-201ENST00000565246 2704 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 AL034549.2-201ENST00000618285 3373 ntBASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC28BQ9BUN5 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC120338.1-201ENST00000625074 1541 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 RN7SKP257-201ENST00000364525 309 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 MIR551A-201ENST00000385042 96 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 Z82198.3-201ENST00000421145 199 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 RPL36AP10-201ENST00000421785 322 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 RPL12P17-201ENST00000432393 498 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 UBE2V2P3-201ENST00000433562 437 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC022133.1-201ENST00000490961 571 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AP000926.3-201ENST00000497201 299 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 RBBP4P1-201ENST00000502424 1276 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC116917.1-201ENST00000520558 305 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AP000859.1-201ENST00000525536 307 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC022884.2-201ENST00000578535 580 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC015849.6-201ENST00000605454 474 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AL451049.1-201ENST00000608672 497 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 AC022960.2-201ENST00000616300 666 ntBASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC28BQ9BUN5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 IFIT1P1-201ENST00000400497 1449 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 RNA5SP131-201ENST00000365452 119 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 RN7SKP199-201ENST00000410325 305 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AL139158.1-201ENST00000424719 340 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 HMGB3P24-201ENST00000433260 622 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 UBE2V2P1-201ENST00000434717 398 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC046176.1-201ENST00000435260 1170 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC093890.1-201ENST00000502554 540 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC073358.1-201ENST00000505671 684 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 MRPS16P1-201ENST00000523462 412 ntBASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC28BQ9BUN5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms