Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VRK1Q99986 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 RN7SKP250-201ENST00000363924 321 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RNA5SP85-201ENST00000365378 119 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VRK1Q99986 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 AL133260.1-201ENST00000405720 405 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC007568.1-201ENST00000422912 471 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 GPN3P1-201ENST00000423883 535 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC128677.1-201ENST00000436016 442 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 LINC00328-2P-201ENST00000436585 219 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 ARL5AP2-201ENST00000444698 533 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 RPL26P30-201ENST00000453533 435 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 PRDX3P4-201ENST00000470828 747 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RPL23AP37-201ENST00000479658 549 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RPL7P40-201ENST00000481703 745 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RN7SL561P-201ENST00000488553 281 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AL117692.1-201ENST00000494283 713 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC010486.2-201ENST00000505572 483 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC104108.1-201ENST00000509930 412 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC117522.2-201ENST00000510049 657 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC026782.2-201ENST00000510845 636 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC010486.3-201ENST00000511602 785 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 RNU5A-4P-201ENST00000516588 111 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 snoZ278.1-201ENST00000517059 112 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.7□□□□□ -1.5
VRK1Q99986 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.7□□□□□ -1.5
VRK1Q99986 MIR548Y-201ENST00000582739 110 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC091133.5-201ENST00000603088 301 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AC021749.1-201ENST00000604322 607 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC145207.9-201ENST00000623802 325 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC104446.1-201ENST00000613728 1321 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 AC020658.2-201ENST00000559030 4020 ntBASIC5.7□□□□□ -1.5
VRK1Q99986 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VRK1Q99986 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VRK1Q99986 AC093278.2-201ENST00000564956 2485 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
VRK1Q99986 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 AC104454.1-201ENST00000421341 1401 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 RNA5SP485-201ENST00000365053 119 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VRK1Q99986 ERHP2-201ENST00000402323 299 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VRK1Q99986 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 AL008987.1-201ENST00000415528 237 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 RAC1P8-201ENST00000427086 527 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.69□□□□□ -1.5
VRK1Q99986 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.69□□□□□ -1.5
VRK1Q99986 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 AC092647.3-201ENST00000443044 633 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 AC068135.1-201ENST00000446164 246 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 EXTL2P1-201ENST00000446218 416 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.69□□□□□ -1.5
VRK1Q99986 EEF1B2P3-201ENST00000447718 678 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 OR52E7P-201ENST00000452394 933 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 USP9YP25-201ENST00000457708 443 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 RN7SL168P-201ENST00000463821 279 ntBASIC5.69□□□□□ -1.5
VRK1Q99986 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms