Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
PKP4Q99569 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC025470.1-201ENST00000510053 2032 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 GAPDHP24-201ENST00000328713 983 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PKP4Q99569 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 RN7SKP292-201ENST00000365522 317 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 MT-RNR1-201ENST00000389680 954 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.49□□□□□ -1.53
PKP4Q99569 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC093155.2-201ENST00000420734 937 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 ARAFP1-201ENST00000422172 605 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AL662874.1-201ENST00000426065 230 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 SUMO2P3-201ENST00000438311 288 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 RPL12P11-201ENST00000439970 501 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 MTCO3P43-201ENST00000440974 771 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC005297.1-201ENST00000444765 862 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 LRRC37A14P-201ENST00000452297 462 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 RPL31P53-201ENST00000457065 348 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC007998.1-201ENST00000474156 672 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 AC087672.1-201ENST00000479876 766 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 SNORA43.3-201ENST00000517240 103 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 CYCSP22-201ENST00000517555 339 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC136777.2-201ENST00000522979 358 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC122134.1-201ENST00000565664 1104 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.49□□□□□ -1.53
PKP4Q99569 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC006249.1-201ENST00000621223 471 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC004808.2-201ENST00000627965 773 ntBASIC5.49□□□□□ -1.53
PKP4Q99569 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 AC068870.1-201ENST00000563737 2455 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 TTC39DP-201ENST00000416781 1688 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 AL121886.1-201ENST00000358609 435 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 RNA5SP284-201ENST00000384547 118 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 RNU11-201ENST00000387069 134 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 AC002524.1-201ENST00000411687 547 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 OR10T1P-201ENST00000424327 947 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.48□□□□□ -1.53
PKP4Q99569 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.48□□□□□ -1.53
PKP4Q99569 RPL23AP19-201ENST00000436229 369 ntBASIC5.48□□□□□ -1.53
PKP4Q99569 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.48□□□□□ -1.53
PKP4Q99569 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.48□□□□□ -1.53
PKP4Q99569 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.48□□□□□ -1.53
PKP4Q99569 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.48□□□□□ -1.53
PKP4Q99569 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PKP4Q99569 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms