Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC003973.3-201ENST00000624863 2822 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC245047.2-201ENST00000441060 530 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AL163193.1-201ENST00000444895 788 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC108751.3-201ENST00000461814 1020 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 RN7SL727P-201ENST00000482164 296 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 CDC42P3-201ENST00000518493 633 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC108738.1-201ENST00000603703 237 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AC010632.3-201ENST00000611377 369 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 AL590763.1-201ENST00000398297 1545 ntBASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ECHDC3Q96DC8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AL121839.2-201ENST00000565058 6943 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 OR9K1P-201ENST00000326513 941 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 MIR1178-201ENST00000408396 91 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 CBX1P3-201ENST00000413296 527 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 Z68694.1-201ENST00000413929 841 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC017019.1-201ENST00000426129 261 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 NANOGP4-201ENST00000427230 913 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC104634.1-201ENST00000452720 462 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC079168.1-201ENST00000458741 345 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RN7SL172P-201ENST00000460535 303 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RN7SL30P-201ENST00000488416 306 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RPS4XP14-201ENST00000493072 781 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC015864.1-201ENST00000496512 544 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 NPM1P5-201ENST00000557228 838 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC106730.2-201ENST00000566641 540 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC005252.1-201ENST00000604518 1063 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC007786.3-201ENST00000615154 596 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 MTCO1P1-201ENST00000624263 1081 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 CYP4F35P-202ENST00000636121 390 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC099654.6-201ENST00000636487 512 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 AC092451.3-201ENST00000625067 1343 ntBASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ECHDC3Q96DC8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 PROS2P-201ENST00000474651 1951 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 SAMM50P1-201ENST00000455403 1399 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AL445213.1-201ENST00000412589 747 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC009784.1-201ENST00000426484 460 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AC124944.2-201ENST00000429866 1242 ntBASIC5.35□□□□□ -1.55
ECHDC3Q96DC8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms