Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPEP1-201ENST00000504507 658 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RN7SKP34-201ENST00000516142 244 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AL512310.9-201ENST00000553311 948 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 FAM106CP-201ENST00000582212 507 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 BNIP3P40-201ENST00000596017 556 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC027334.1-201ENST00000603257 310 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AF129408.1-201ENST00000608767 431 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC005156.1-201ENST00000613371 573 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC016769.4-201ENST00000616893 535 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AL445528.2-201ENST00000620582 470 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 MIR6730-201ENST00000622213 67 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AC018445.2-201ENST00000622987 260 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 IMMTP1-201ENST00000435590 2219 ntBASIC5.84□□□□□ -1.47
HMGB4Q8WW32 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGB4Q8WW32 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 THAP12P9-201ENST00000503971 2360 ntBASIC5.84□□□□□ -1.48
HMGB4Q8WW32 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.84□□□□□ -1.48
HMGB4Q8WW32 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AL359715.4-201ENST00000606629 1436 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC235565.1-201ENST00000456962 1325 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 SNORA58B-201ENST00000364259 136 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 TAF9BP2-201ENST00000400856 499 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 RNU4-27P-201ENST00000410889 139 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 RPL26P37-201ENST00000411983 438 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC007562.1-201ENST00000421819 517 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC007394.1-201ENST00000421941 531 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC079922.1-201ENST00000443291 359 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC023274.2-201ENST00000445264 521 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC018635.1-201ENST00000468292 1030 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 RPL35AP19-201ENST00000469425 329 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 SCARNA1-201ENST00000517138 166 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC021678.3-201ENST00000517893 476 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 FKBP1AP1-201ENST00000594588 318 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AF230666.2-201ENST00000602328 725 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 IMMP1LP3-201ENST00000604197 224 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AL137246.2-201ENST00000613439 662 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC005840.5-201ENST00000619166 599 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC090772.4-201ENST00000623599 362 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 AC053481.2-202ENST00000582394 1500 ntBASIC5.83□□□□□ -1.48
HMGB4Q8WW32 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGB4Q8WW32 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGB4Q8WW32 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms