Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 AC011379.1-201ENST00000508713 3025 ntBASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 CASC19-260ENST00000641828 2001 ntBASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
CCDC168Q8NDH2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 BX322650.1-201ENST00000332359 2143 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 EIF2S2P2-201ENST00000447161 982 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC097484.1-201ENST00000471148 389 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 MRPS33P2-201ENST00000507850 322 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AL109766.1-201ENST00000555080 552 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 RN7SL356P-201ENST00000582228 248 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 MIR4737-201ENST00000583979 81 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 MIR6830-201ENST00000636015 70 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC005618.1-201ENST00000606901 3148 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC005725.1-201ENST00000577346 2607 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 BX284613.1-201ENST00000452221 1641 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 RN7SKP149-201ENST00000363008 344 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC069213.2-201ENST00000420238 366 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC004074.1-201ENST00000421810 1063 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC025674.1-201ENST00000507074 324 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AP000769.2-201ENST00000602344 396 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC010857.1-201ENST00000606398 594 ntBASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC168Q8NDH2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 MIR551A-201ENST00000385042 96 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 NUDT19P3-201ENST00000404698 555 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 RN7SKP151-201ENST00000410230 316 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 RNA5SP113-201ENST00000410486 84 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 CENPIP1-201ENST00000425713 902 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 TMEM183AP1-205ENST00000432739 290 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 PPIAP21-201ENST00000464473 501 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL121834.1-201ENST00000572284 509 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC099654.2-201ENST00000433031 1980 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 RNA5SP171-201ENST00000391071 115 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL451062.2-201ENST00000427515 271 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL513533.1-201ENST00000453728 415 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL022319.1-201ENST00000458183 1167 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 COX6B1P5-201ENST00000509843 249 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 AC027279.1-201ENST00000568885 4284 ntBASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC168Q8NDH2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms