Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC079298.1-201ENST00000625026 1619 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC091305.2-201ENST00000624049 1576 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 YWHAZP6-201ENST00000399764 738 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AL096711.1-201ENST00000404780 554 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 RN7SKP38-201ENST00000410782 309 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 MRPL53P1-201ENST00000414323 319 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 NENFP1-201ENST00000419476 466 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AKR1B10P1-201ENST00000425765 942 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 LINC00328-2P-201ENST00000436585 219 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 RPL5P7-201ENST00000444235 813 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 NPM1P39-201ENST00000449818 867 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC009963.3-201ENST00000458090 486 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC021660.1-201ENST00000465006 554 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SEPT7P6-201ENST00000469999 1143 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC008410.1-201ENST00000483777 339 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC009120.1-201ENST00000493458 473 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SCARNA20.4-201ENST00000516969 131 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC022360.1-201ENST00000521058 340 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC084121.1-201ENST00000533882 835 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 DUX4L52-201ENST00000549363 777 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AL356801.1-201ENST00000559320 294 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC092266.1-201ENST00000610958 165 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AC073869.8-201ENST00000641806 335 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 AL034549.2-201ENST00000618285 3373 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 ADAM5-202ENST00000399789 1942 ntBASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AL672167.2-201ENST00000377164 879 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 SNORA51.9-201ENST00000384295 124 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 RNA5SP231-201ENST00000410496 138 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC098592.2-201ENST00000413158 265 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC096644.3-201ENST00000416788 338 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 BX284632.2-201ENST00000421091 399 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC007161.1-204ENST00000423039 460 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AL512605.1-202ENST00000441919 381 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AL359955.2-201ENST00000445380 353 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC012512.1-201ENST00000446594 718 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 RN7SL583P-201ENST00000475692 287 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC022215.1-201ENST00000481770 362 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AGGF1P3-201ENST00000493675 1213 ntBASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC71LQ8N9Z2 AC147055.1-201ENST00000509261 750 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms