Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AP002001.2-201ENST00000529025 1469 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNU4-73P-201ENST00000363164 141 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.263-201ENST00000364659 114 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNU4-91P-201ENST00000364778 135 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 Y_RNA.356-201ENST00000365475 113 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNA5SP53-201ENST00000391299 120 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MRPL32P1-201ENST00000406301 247 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CCNG1P1-201ENST00000406783 885 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL451061.1-201ENST00000407887 862 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RPS7P13-201ENST00000413955 498 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 XKRYP4-201ENST00000414395 483 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC008072.1-201ENST00000434254 824 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RPS7P4-201ENST00000444127 582 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 COX6CP12-201ENST00000446748 202 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL627224.1-201ENST00000448334 444 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 XKRYP5-201ENST00000449659 483 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC072039.1-201ENST00000477611 581 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC025271.1-201ENST00000485045 429 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MTCYBP18-201ENST00000501056 747 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNF138P1-201ENST00000502765 546 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SCARNA18.2-201ENST00000516882 84 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 NPM1P52-201ENST00000518264 846 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 NXPE2P1-201ENST00000543705 726 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 OR7E19P-202ENST00000589942 844 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC024085.1-201ENST00000604299 432 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC012360.2-201ENST00000609349 391 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC131009.3-201ENST00000621809 287 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC006453.3-201ENST00000635891 377 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC243725.1-201ENST00000637164 436 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC007382.1-201ENST00000624376 2618 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC092821.3-202ENST00000641304 2767 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MAPK10-383ENST00000642032 3390 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC007998.4-201ENST00000612496 2533 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 AC089998.1-201ENST00000548575 3141 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATG4DQ86TL0 NXF4-202ENST00000416098 1465 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 TEX21P-201ENST00000447107 1476 ntBASIC6.29□□□□□ -1.4
ATG4DQ86TL0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms