Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MTND6P2-201ENST00000512226 524 ntBASIC6.48□□□□□ -1.37
CTR9Q6PD62 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC007066.2-202ENST00000566531 914 ntBASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC015712.7-201ENST00000615211 635 ntBASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC109583.2-201ENST00000617367 129 ntBASIC6.48□□□□□ -1.37
CTR9Q6PD62 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTR9Q6PD62 AC004808.2-201ENST00000627965 773 ntBASIC6.48□□□□□ -1.37
CTR9Q6PD62 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTR9Q6PD62 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.48□□□□□ -1.37
CTR9Q6PD62 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CTR9Q6PD62 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 NR1H5P-201ENST00000452683 1377 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 RN7SKP74-201ENST00000362849 309 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 RN7SKP278-201ENST00000410504 342 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 SMC4P1-201ENST00000414479 527 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AL121578.1-201ENST00000428051 892 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 GSTM5P1-201ENST00000434751 660 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AL163193.1-201ENST00000444895 788 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 RN7SL799P-201ENST00000475891 298 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 HMGB1P44-201ENST00000508597 572 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC021106.1-201ENST00000509020 1058 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 OR7E18P-201ENST00000592589 702 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AP000769.2-201ENST00000602344 396 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 AL512329.2-201ENST00000607350 548 ntBASIC6.47□□□□□ -1.37
CTR9Q6PD62 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.47□□□□□ -1.37
CTR9Q6PD62 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTR9Q6PD62 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CTR9Q6PD62 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CTR9Q6PD62 ICE2P1-201ENST00000512800 1849 ntBASIC6.46□□□□□ -1.37
CTR9Q6PD62 AC004076.2-201ENST00000620532 3323 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 SETP15-201ENST00000412724 337 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC079809.1-201ENST00000415468 276 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 SLC35E1P1-201ENST00000419313 864 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 LINC02210-201ENST00000444561 288 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 IGBP1P3-201ENST00000447449 1000 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AL672138.1-201ENST00000450604 1015 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 RN7SL727P-201ENST00000482164 296 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 RPS21P4-201ENST00000487122 248 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 SCARNA16.4-201ENST00000516956 187 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AP004607.2-201ENST00000533949 322 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 AL353796.1-201ENST00000561542 3241 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 DPRXP4-201ENST00000578053 568 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AP005262.1-201ENST00000582646 997 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC060766.1-201ENST00000590824 627 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 AL139041.1-201ENST00000605480 610 ntBASIC6.46□□□□□ -1.38
CTR9Q6PD62 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
CTR9Q6PD62 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTR9Q6PD62 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTR9Q6PD62 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.45□□□□□ -1.38
CTR9Q6PD62 AP005432.1-201ENST00000580891 3485 ntBASIC6.45□□□□□ -1.38
CTR9Q6PD62 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms