Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 RNU4-39P-201ENST00000362455 127 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 RNA5SP132-201ENST00000364725 118 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 RNA5SP30-201ENST00000365552 115 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 GAPDHP42-201ENST00000406848 981 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 MTND4LP13-201ENST00000425022 298 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AL450996.1-201ENST00000445574 1202 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC089999.1-201ENST00000460336 374 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC079080.1-201ENST00000479841 822 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AL049872.1-201ENST00000556323 322 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC005520.3-201ENST00000602874 370 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AP000894.4-201ENST00000610185 483 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC022467.1-201ENST00000614738 749 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC008115.3-201ENST00000614874 549 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AL049767.1-202ENST00000637826 242 ntBASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX30Q5VWJ9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 AC006484.1-201ENST00000435086 1884 ntBASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX30Q5VWJ9 MTCO1P11-201ENST00000429111 1528 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 RNU6-1263P-201ENST00000384601 106 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AL513325.1-201ENST00000417716 1034 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 VN1R21P-201ENST00000426703 765 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 RPS27AP6-201ENST00000427962 448 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC099670.2-201ENST00000435130 321 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AL500527.1-201ENST00000448532 255 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AP002345.1-201ENST00000456493 928 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 LDHBP2-201ENST00000456969 1005 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 RN7SL72P-201ENST00000460697 269 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC018638.3-201ENST00000461273 132 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 NPM1P28-201ENST00000492269 840 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC109481.1-201ENST00000509173 282 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC026688.1-201ENST00000520639 1168 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 OR10D4P-201ENST00000525892 951 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 OR8Q1P-201ENST00000526467 655 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AL356608.1-201ENST00000610034 820 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC090607.5-201ENST00000615692 224 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC015660.5-201ENST00000623238 564 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 AC079776.5-201ENST00000641920 211 ntBASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX30Q5VWJ9 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms