Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CCT8P1-201ENST00000413611 1657 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 SNORA70F-201ENST00000384142 135 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RN7SKP151-201ENST00000410230 316 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RPS27AP12-201ENST00000429552 465 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC093414.1-201ENST00000434712 514 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RPS27AP3-201ENST00000453803 454 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RN7SL165P-201ENST00000477476 291 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC013356.1-201ENST00000489027 564 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AP001781.1-201ENST00000530977 207 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 YWHABP2-201ENST00000540201 713 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 SCARNA15-201ENST00000607520 4325 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 CASC19-255ENST00000641733 1385 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 DBIP1-201ENST00000401435 260 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 CEACAMP8-201ENST00000413902 580 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 MIR3939-201ENST00000582614 106 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC013268.3-201ENST00000262716 2324 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 NDUFA5P8-201ENST00000449019 346 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 RN7SL356P-201ENST00000582228 248 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 MIR4715-201ENST00000584117 79 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 AC027334.1-201ENST00000603257 310 ntBASIC5.18□□□□□ -1.58
RIF1Q5UIP0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RIF1Q5UIP0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AP002991.2-201ENST00000623807 2801 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 SNORD46.1-201ENST00000364139 104 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 RNA5SP43-201ENST00000516559 110 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RIF1Q5UIP0 OR1L6-202ENST00000373684 1044 ntBASIC5.17□□□□□ -1.58
RIF1Q5UIP0 AL049697.2-201ENST00000403708 294 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 288.6 ms