Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 OR10V3P-201ENST00000525712 725 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC025260.1-201ENST00000548858 430 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC122134.1-201ENST00000565664 1104 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ATP5F1P7-201ENST00000567330 760 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC068768.2-201ENST00000602352 343 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AP001823.1-201ENST00000604056 1003 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC098935.2-201ENST00000604222 466 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 RNU4-5P-201ENST00000607255 135 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC009974.1-201ENST00000608881 455 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 BX323046.1-201ENST00000610145 535 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 RFPL4AP6-201ENST00000616792 846 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC004232.3-201ENST00000622977 525 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC104985.3-201ENST00000623479 597 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 AC103703.1-201ENST00000634783 663 ntBASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CCDC144BQ3MJ40 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 ZNF402P-201ENST00000404435 3100 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 GTF2H2B-203ENST00000508065 1432 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 RN7SKP81-201ENST00000365603 331 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC130360.1-201ENST00000425489 1117 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AL390879.1-201ENST00000439143 386 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC092967.1-201ENST00000449016 481 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 SNX18P26-201ENST00000458433 740 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC020699.1-201ENST00000505161 445 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC104417.1-201ENST00000523974 751 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC130365.2-201ENST00000525882 1201 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC007448.1-201ENST00000582714 234 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC011445.2-201ENST00000599274 173 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 PART1_2.1-201ENST00000612397 250 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC138907.10-201ENST00000623708 983 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 MAPK10-287ENST00000641217 3037 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AC092724.1-201ENST00000624623 3397 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 AOX3P-204ENST00000491025 2107 ntBASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC144BQ3MJ40 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 AL133268.1-201ENST00000405676 1401 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.11□□□□□ -1.27
CCDC144BQ3MJ40 RNA5SP477-201ENST00000362639 119 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms