Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 AC015689.2-201ENST00000528172 1738 ntBASIC3.62□□□□□ -1.83
RPL39P62891 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPL39P62891 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 RNU1-74P-201ENST00000384108 171 ntBASIC3.62□□□□□ -1.83
RPL39P62891 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 AL662874.1-201ENST00000426065 230 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AL139148.1-201ENST00000427122 680 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC009238.2-201ENST00000431026 355 ntBASIC3.62□□□□□ -1.83
RPL39P62891 RPS26P4-201ENST00000431743 355 ntBASIC3.62□□□□□ -1.83
RPL39P62891 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.62□□□□□ -1.83
RPL39P62891 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 CYCSP51-201ENST00000443545 318 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AP006222.1-205ENST00000450734 457 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
RPL39P62891 AC005412.2-201ENST00000492004 341 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.62□□□□□ -1.83
RPL39P62891 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 AC109481.1-201ENST00000509173 282 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.62□□□□□ -1.83
RPL39P62891 AC138938.1-201ENST00000515431 782 ntBASIC3.62□□□□□ -1.83
RPL39P62891 RNA5SP249-201ENST00000516127 99 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC027308.1-201ENST00000517993 110 ntBASIC3.62□□□□□ -1.83
RPL39P62891 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.62□□□□□ -1.83
RPL39P62891 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.62□□□□□ -1.83
RPL39P62891 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.62□□□□□ -1.83
RPL39P62891 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 AC060766.1-201ENST00000590824 627 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPL39P62891 MIR6774-201ENST00000614651 70 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC024884.1-201ENST00000620583 399 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC129778.1-202ENST00000623812 261 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AP001052.1-201ENST00000626421 99 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AC063952.1-203ENST00000634410 658 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AL591379.1-207ENST00000635982 261 ntBASIC3.62□□□□□ -1.83
RPL39P62891 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.62□□□□□ -1.83
RPL39P62891 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RPL39P62891 LINC01963-201ENST00000562038 3148 ntBASIC3.62□□□□□ -1.83
RPL39P62891 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.62□□□□□ -1.83
RPL39P62891 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 AC107068.1-201ENST00000563286 4218 ntBASIC3.62□□□□□ -1.83
RPL39P62891 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.62□□□□□ -1.83
RPL39P62891 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.62□□□□□ -1.83
RPL39P62891 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.62□□□□□ -1.83
RPL39P62891 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RPL39P62891 RNA5SP433-201ENST00000364491 114 ntBASIC3.61□□□□□ -1.83
RPL39P62891 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RPL39P62891 MIR1275-201ENST00000408770 80 ntBASIC3.61□□□□□ -1.83
RPL39P62891 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 Z93019.1-201ENST00000416450 973 ntBASIC3.61□□□□□ -1.83
RPL39P62891 GNG5P5-201ENST00000420444 220 ntBASIC3.61□□□□□ -1.83
RPL39P62891 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.61□□□□□ -1.83
RPL39P62891 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.61□□□□□ -1.83
RPL39P62891 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 PRUNEP1-201ENST00000425846 705 ntBASIC3.61□□□□□ -1.83
RPL39P62891 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.61□□□□□ -1.83
RPL39P62891 FMO7P-201ENST00000436045 768 ntBASIC3.61□□□□□ -1.83
RPL39P62891 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.61□□□□□ -1.83
RPL39P62891 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms